BO27178.complete Sequence
991 bp assembled on 2010-09-22
GenBank Submission: KX799950
> BO27178.complete
GAAGTTATCAGTCGACATGGAAGCGCCGGTGAAGGGCATTATTGGTATTC
TGGCCACTGCTGGATCGTTTTTTGCACTAGGAGCTTACTATCAGCACATC
GATGTCATGCGAAAGATTCGACGATTGGAGCAACGAAACCCACATGCCTA
CTTTATCAGAAGGAAACTGTACGCACTGCTGGGAATTTTCGCTGTGCGCC
CTGATAACTCAGAATTCGACGTGGATACCGATGACTGCCACAAGCTGGGC
GGGATCATGAAGTACGGCTTCCCCAGCACCAATGATATCACCATAAATGA
GACCTTTGACTTTGTGACCTCTTTCGATCGAAGAAACTCTGCGATTCTGT
GGATGTGCGAGCGGGTAGATCTGTCCAATCGCGTCGTCTACGGGGATTCC
ACATCCGTGGCTCCAGCTGGAGCATTTGGACAGTCGGAGGCAGCCAGGGT
ATTTTTCCTGTCCAACATTAGGCCCTTTCTAAACAGAGGGTTCAATCTCA
CTGTCTGGGATCGACTGCTGCAGTACGTCCATGAGATGAGTCAACGACAT
GGAACCGTGTATGCCTACACCGGATCAATTTACTTGCCCCGGGAGCTAAA
GTCGAACAGTTGGTTCCTGGAGTTCCAGTCGGAGGAGAGAACCATGGTGG
CCGTACCCACCCATTTCTTCAAGATCCTGGTCATTGATAAGAAGTTCGCG
GGCGATACCATTCCCTATGCGGAGGCCTATGTGATGCCCAACTCTCCGCT
GAACAACAATGTCGAACTGAAGACGCTTCTCAGCGATGTCCGGGAAATAG
AAAACGCTACTGGTCTACGGTTCTTTGAAGGACTCGACCGCAACTTTGTC
AACACCCAAGCATCAAATTCATTTGTCCCCTCAGTAAACGGTCCTTTAAC
AAATCCGTTAACGTTGCCGATGACTAATGCCTTAGACAGTCACAGTGCCC
TCACATCAAGTATTTCTCCAAAAGCAAGCTTTCTAGACCAT
BO27178.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:45:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl1-RA | 960 | CG31682-PA | 1..957 | 17..973 | 4785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:45:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl1-RA | 1108 | CG31682-RA | 92..1048 | 17..973 | 4785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:45:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2239474..2240269 | 973..178 | 3980 | 100 | Minus |
| 2L | 23513712 | 2L | 2240341..2240502 | 178..17 | 810 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:45:52 has no hits.
BO27178.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:25 Download gff for
BO27178.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31682-RA | 92..1044 | 17..969 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:20 Download gff for
BO27178.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tengl1-RA | 92..1044 | 17..969 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:03:18 Download gff for
BO27178.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tengl1-RA | 92..1044 | 17..969 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:03:18 Download gff for
BO27178.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2239478..2240268 | 179..969 | 100 | <- | Minus |
| 2L | 2240341..2240502 | 17..178 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:20 Download gff for
BO27178.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2239478..2240268 | 179..969 | 100 | <- | Minus |
| arm_2L | 2240341..2240502 | 17..178 | 100 | | Minus |
BO27178.pep Sequence
Translation from 16 to 991
> BO27178.pep
MEAPVKGIIGILATAGSFFALGAYYQHIDVMRKIRRLEQRNPHAYFIRRK
LYALLGIFAVRPDNSEFDVDTDDCHKLGGIMKYGFPSTNDITINETFDFV
TSFDRRNSAILWMCERVDLSNRVVYGDSTSVAPAGAFGQSEAARVFFLSN
IRPFLNRGFNLTVWDRLLQYVHEMSQRHGTVYAYTGSIYLPRELKSNSWF
LEFQSEERTMVAVPTHFFKILVIDKKFAGDTIPYAEAYVMPNSPLNNNVE
LKTLLSDVREIENATGLRFFEGLDRNFVNTQASNSFVPSVNGPLTNPLTL
PMTNALDSHSALTSSISPKASFLDH
BO27178.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl1-PA | 319 | CG31682-PA | 1..319 | 1..319 | 1660 | 100 | Plus |
| Tengl2-PA | 318 | CG32463-PA | 13..300 | 8..276 | 460 | 34.2 | Plus |
| Tengl4-PA | 378 | CG4683-PA | 128..362 | 72..276 | 303 | 29.7 | Plus |
| Tengl3-PA | 337 | CG31679-PA | 22..325 | 19..294 | 270 | 27.3 | Plus |
| EndoG-PA | 310 | CG8862-PA | 1..304 | 1..280 | 260 | 27.1 | Plus |
