BO27179.complete Sequence
793 bp assembled on 2010-09-22
GenBank Submission: KX796184
> BO27179.complete
GAAGTTATCAGTCGACATGGGAGATCGCAACAAGCAGCCGGTTATTCTGC
TGAAGGTTCCGTCCTCCGATGATTTCTATGGTTCGGCGTTGCGCAGCCAT
AACCTGGATCCCATCTTCATTACTCCCTCGCATTTTGTGTTCAAGAATCT
GAAGCAATTGCAAGCCAAGTTGCATGAGCCGCACAAATATGCCGGGATTA
TATTTGCATCCCCGCGCTGTGTCCAAGCTGTAAACGAGGCACTAGGAAAG
ACACCACTTCCTAGTTGCTGGCGTGCGTTACACAATTATTCCCTAGGCAA
GAACACGCACAGCGCCGCCTGGATAACATTCCAGAATCTTCCGACTCTGG
GCGATCATGCCGTGAATGCAAACAATCTGTGCGATCTGATCGTGGAGACG
TTTGGACCCAAGAGGGATCTGCCACTGCTCATGCCCTGCGGCAATGGCGT
GGGTCAGACACTGCGCCTCCGTTTGGTCGCCCAGGGATTCCGGGTGGATG
CCTGCGAAGTGTACGAGAGTCGGTCGCATCCGGATTTCGTCAATCAGATG
CGGCACGCCCTCAAATTCAAGCGAATGGAAACGATTGTGTTCTTCGGACC
CTCCAGTGTCCGCAGCTCCTTGGAGTTCTTTGGGAACTACAACGTTTCGC
TTAAGGATCGCAAGCTGATAGCCGTGGGCAGTGGCACCAGGAAGGCAATG
GAGGAATCTGGAATTAAGGCGGACGGAGTCGTGAATGCTGCTGACGTCGA
CCGCCTGATAAATATCATCAAAACAGCAAGCTTTCTAGACCAT
BO27179.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:46:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9589-RA | 762 | CG9589-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:46:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9589-RA | 974 | CG9589-RA | 83..842 | 16..775 | 3800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:46:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15788603..15789362 | 16..775 | 3800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:46:21 has no hits.
BO27179.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:27 Download gff for
BO27179.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9589-RA | 84..842 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:23 Download gff for
BO27179.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9589-RA | 84..842 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:03:30 Download gff for
BO27179.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9589-RA | 84..842 | 17..777 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:03:30 Download gff for
BO27179.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15788604..15789362 | 17..777 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:23 Download gff for
BO27179.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11614326..11615084 | 17..777 | 99 | | Plus |
BO27179.pep Sequence
Translation from 16 to 793
> BO27179.pep
MGDRNKQPVILLKVPSSDDFYGSALRSHNLDPIFITPSHFVFKNLKQLQA
KLHEPHKYAGIIFASPRCVQAVNEALGKTPLPSCWRALHNYSLGKNTHSA
AWITFQNLPTLGDHAVNANNLCDLIVETFGPKRDLPLLMPCGNGVGQTLR
LRLVAQGFRVDACEVYESRSHPDFVNQMRHALKFKRMETIVFFGPSSVRS
SLEFFGNYNVSLKDRKLIAVGSGTRKAMEESGIKADGVVNAADVDRLINI
IKTASFLDH
BO27179.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9589-PA | 253 | CG9589-PA | 1..253 | 1..253 | 1327 | 100 | Plus |
CG1885-PB | 277 | CG1885-PB | 1..253 | 1..251 | 513 | 41.9 | Plus |
CG1885-PA | 277 | CG1885-PA | 1..253 | 1..251 | 513 | 41.9 | Plus |