BO27182.complete Sequence
832 bp assembled on 2010-09-22
> BO27182.complete
GAAGTTATCAGTCGACATGCGCATGCTTTTTATGATTTTCACAATAGCCG
AGCGAAGTTTCAAGATTCTAGAACTACCCACCACACCAACGCTTCTGCTG
CGCCGCCAGTCCCACAACTACGGCTACGACTACATCAGCCCCACGCACAT
CGAACTCAGCCGGGAAGCAACTCGCCTGGTAATTCGCCGTCTGCAGCGCA
CCGTTCTCCGCCTGATCCGTGACCCGGACTTCATCATGTCTGCCGAGGCG
AATCCCGAGATGGATAAGGAGCACCACGAGTCCCCATTCGCAGCGAACCG
CAAGGCCGGTGCCAGCGGCGCCGGCAAACAGGACTCGAACTGCCGCACCT
GCAACGATTTCAAGTCGTGGTCCAAGCAGCAACGCCTCATCTCCAACGTG
CAGAGCGCCAAGGTGAAGCACATGGCCGCCGCCGAAAAGCTGACCGTCAA
CGCCGCCGAAGATCCGCTGCCCCGCGACGACTGCCCGCTGGACAAGGTGA
GGCTGGGAATTTCCACCTGGGGACTGCTCCACACCATGGCCGCCTTTTAC
TCGGACAACCCCACGGACACCGAGAAGCGCGACATGAAGACCTTTTTTGA
GGTTCTGTCGCGCCTTTACCCCTGCGAGTTTTGCGCCAAGGACTTTCGCA
CCGACCTGGACGTCAACCCCATCAATGTGAACTCCCAAAAGGAGCTAGCA
CTGTGGCTGTGCAAGTTCCACAACCGAGTGAACGACAAACTGGGCAAACC
GCTCTTCGATTGCACCAAGGTGAACGAGAGGTGGCGCGACGGCTGGCTAG
ACGGCTCCTGCGACGCAAGCTTTCTAGACCAT
BO27182.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:46:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Alr-RB | 801 | CG12534-PB | 1..798 | 17..814 | 3990 | 100 | Plus |
Alr-RA | 786 | CG12534-PA | 1..783 | 32..814 | 3915 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:46:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Alr-RB | 1362 | CG12534-RB | 245..1043 | 16..814 | 3995 | 100 | Plus |
Alr-RA | 1107 | CG12534-RA | 1..788 | 27..814 | 3940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:46:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19748912..19749312 | 16..416 | 2005 | 100 | Plus |
X | 23542271 | X | 19749386..19749629 | 411..654 | 1220 | 100 | Plus |
X | 23542271 | X | 19749689..19749848 | 655..814 | 800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:46:29 has no hits.
BO27182.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:28 Download gff for
BO27182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12534-RA | 1..792 | 23..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:25 Download gff for
BO27182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Alr-RB | 176..973 | 17..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:03:33 Download gff for
BO27182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Alr-RB | 246..1043 | 17..816 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:03:33 Download gff for
BO27182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19749689..19749848 | 655..816 | 98 | | Plus |
X | 19748913..19749308 | 17..412 | 100 | -> | Plus |
X | 19749388..19749629 | 413..654 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:25 Download gff for
BO27182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19642946..19643341 | 17..412 | 100 | -> | Plus |
arm_X | 19643421..19643662 | 413..654 | 100 | -> | Plus |
arm_X | 19643722..19643881 | 655..816 | 98 | | Plus |
BO27182.pep Sequence
Translation from 16 to 832
> BO27182.pep
MRMLFMIFTIAERSFKILELPTTPTLLLRRQSHNYGYDYISPTHIELSRE
ATRLVIRRLQRTVLRLIRDPDFIMSAEANPEMDKEHHESPFAANRKAGAS
GAGKQDSNCRTCNDFKSWSKQQRLISNVQSAKVKHMAAAEKLTVNAAEDP
LPRDDCPLDKVRLGISTWGLLHTMAAFYSDNPTDTEKRDMKTFFEVLSRL
YPCEFCAKDFRTDLDVNPINVNSQKELALWLCKFHNRVNDKLGKPLFDCT
KVNERWRDGWLDGSCDASFLDH
BO27182.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Alr-PB | 266 | CG12534-PB | 1..266 | 1..266 | 1421 | 100 | Plus |
Alr-PA | 261 | CG12534-PA | 1..261 | 6..266 | 1396 | 100 | Plus |