BO27206.complete Sequence
373 bp assembled on 2010-08-18
GenBank Submission: KX796376
> BO27206.complete
GAAGTTATCAGTCGACATGCGTTACGTGGCTGCTTACCTTCTGGCCGTCC
TCGGTGGCAAGGACTCGCCCGCCAACAGCGATCTGGAGAAGATCCTCAGC
TCTGTGGGCGTTGAGGTCGACGCCGAGCGTCTGACCAAGGTCATCAAGGA
GCTGGCTGGCAAGAGCATCGACGACCTGATCAAGGAGGGTCGCGAGAAGC
TCTCCTCGATGCCGGTGGGCGGCGGTGGTGCCGTCGCAGCCGCTGATGCC
GCACCCGCTGCCGCCGCCGGTGGCGACAAGAAGGAGGCCAAGAAGGAGGA
GAAGAAGGAGGAGTCCGAGTCCGAGGATGACGACATGGGCTTCGCTCTCT
TCGAAGCAAGCTTTCTAGACCAT
BO27206.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:44:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpLP2-RA | 342 | CG4918-PA | 1..339 | 17..355 | 1695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpLP2-RA | 604 | CG4918-RA | 93..433 | 15..355 | 1705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16586221..16586561 | 15..355 | 1705 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:44:33 has no hits.
BO27206.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:41 Download gff for
BO27206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpLP2-RB | 130..468 | 17..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:53 Download gff for
BO27206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpLP2-RA | 95..433 | 17..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:27 Download gff for
BO27206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpLP2-RA | 95..433 | 17..357 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:27 Download gff for
BO27206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16586223..16586561 | 17..357 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:53 Download gff for
BO27206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12473728..12474066 | 17..357 | 99 | | Plus |
BO27206.pep Sequence
Translation from 16 to 373
> BO27206.pep
MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKS
IDDLIKEGREKLSSMPVGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEES
ESEDDDMGFALFEASFLDH
BO27206.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:25:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpLP2-PA | 113 | CG4918-PA | 1..113 | 1..113 | 551 | 100 | Plus |
RpLP1-PB | 112 | CG4087-PB | 28..112 | 23..113 | 146 | 43.6 | Plus |
RpLP1-PA | 112 | CG4087-PA | 28..112 | 23..113 | 146 | 43.6 | Plus |