BO27207.complete Sequence
385 bp assembled on 2010-08-18
GenBank Submission: KX797089
> BO27207.complete
GAAGTTATCAGTCGACATGAAGGCCTTGCAATTCGCTCTTGTATTTTCGG
CCATTCTGGCCATTGCCTTCGCTGCAAATGCCAGTTGGGGAGCCAAATTG
TCCAGCAGTAAGTTGGTCAGCACTCAGAACGTGACCATCTACAAGAAGGC
CAACCAATATGTGAGCAGTCTCATCAGTTTCCCACTGGCGGGCCAGAGCA
ACACTAAAACCATTCGGTACATTAGCATAACTGATAGGTTTACCAACAGT
TCGGGACCTTACTCCACCTTGTGGTCCGGTGGACCAGGATTCATCAATGC
CCAGGTCAATGTCACAAGCCAGTTTTCTCAAGGAATCAATGTAACTGCTC
AATTTTGGGTGGATGCCGCAAGCTTTCTAGACCAT
BO27207.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:44:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31789-RC | 354 | CG31789-PC | 1..351 | 17..367 | 1755 | 100 | Plus |
CG31789-RB | 354 | CG31789-PB | 1..351 | 17..367 | 1755 | 100 | Plus |
CG31789-RA | 354 | CG31789-PA | 1..351 | 17..367 | 1755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31789-RC | 695 | CG31789-RC | 15..365 | 17..367 | 1755 | 100 | Plus |
CG31789-RB | 472 | CG31789-RB | 15..365 | 17..367 | 1755 | 100 | Plus |
CG31789-RA | 534 | CG31789-RA | 15..365 | 17..367 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18606177..18606354 | 190..367 | 890 | 100 | Plus |
2L | 23513712 | 2L | 18605942..18606116 | 17..191 | 875 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:44:27 has no hits.
BO27207.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:40 Download gff for
BO27207.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31789-RA | 1..351 | 17..369 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:51 Download gff for
BO27207.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31789-RA | 15..365 | 17..369 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:26 Download gff for
BO27207.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31789-RA | 15..365 | 17..369 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:26 Download gff for
BO27207.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18605942..18606115 | 17..190 | 100 | -> | Plus |
2L | 18606178..18606354 | 191..369 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:51 Download gff for
BO27207.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18605942..18606115 | 17..190 | 100 | -> | Plus |
arm_2L | 18606178..18606354 | 191..369 | 98 | | Plus |
BO27207.pep Sequence
Translation from 16 to 385
> BO27207.pep
MKALQFALVFSAILAIAFAANASWGAKLSSSKLVSTQNVTIYKKANQYVS
SLISFPLAGQSNTKTIRYISITDRFTNSSGPYSTLWSGGPGFINAQVNVT
SQFSQGINVTAQFWVDAASFLDH
BO27207.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:25:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31789-PC | 117 | CG31789-PC | 1..117 | 1..117 | 586 | 100 | Plus |
CG31789-PB | 117 | CG31789-PB | 1..117 | 1..117 | 586 | 100 | Plus |
CG31789-PA | 117 | CG31789-PA | 1..117 | 1..117 | 586 | 100 | Plus |
CG13323-PB | 112 | CG13323-PB | 1..110 | 4..114 | 145 | 32.5 | Plus |
CG13323-PA | 112 | CG13323-PA | 1..110 | 4..114 | 145 | 32.5 | Plus |