BO27210.complete Sequence
799 bp assembled on 2010-09-17
GenBank Submission: KX795802
> BO27210.complete
GAAGTTATCAGTCGACATGTCCGAAGATGCCAAGAGTCCAGGACCACGCA
CACGGAACATCATCGAGAATCAGCTGTTCCGCCGGCAGCGTAGCCTAAAA
TTGGAGGCACTGCAGCGCCAGCGGACCTTGGATTCCAACGATGGGGTGGA
GGGATTGGGCGCAGATACGGAACCCTTCGACAAGACGCACATCGTCATCA
TCTTTACGGAGAAGGCCAAGCTAAGACACTGTCAGGATGTGGAGAAGATC
ATTCAGGAGTTTGGCATCCAGACCACGCTGGAGATCGTAGGGAAAACCGA
AAAGTATCTCTACCTATCGGCCAGCGTGGATACTCTGCTCCGTTTGGCCG
ATGCCGCCGAGCTGGAGAAGATGACCACCACGCACAGCATGCAAAAGTTC
AATCACGGCTGCATCTCGGACTTTCTACTGCCCGGGATGGGCAAAGAGCA
GATCCTGCGCTACTGCGAGATACCTGTTCTCATCAAGGACGTAATCCAGG
ACGGCATTAAGTCCTACGTGCAAAAGGGCTACATAGAGGATATGTTTCCC
CTCCACGATATCCTGTATCTCGAACGCTTCAACTGGAACCTGAAACGCAC
CAAGCTGCCCATCGAGGACATCCGGAACTACTTTGGTTCCAGTATAGGTC
TTTATTTCGGCTTCATCGAGTTCTACACGAAGGCACTGATCTTTCCCTCC
CTTTTTGGTATACTCCAATATGTATTCGATCTGAACATCTCGCTGGTCTG
CAGTTTCTACGTTGTTTGGACCACGGTGAGTGCAAGCTTTCTAGACCAT
BO27210.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:43:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Axs-RA | 1941 | CG9703-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Axs-RA | 2575 | CG9703-RA | 456..1214 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16682201..16682472 | 562..291 | 1360 | 100 | Minus |
| X | 23542271 | X | 16681904..16682122 | 781..563 | 1095 | 100 | Minus |
| X | 23542271 | X | 16683209..16683357 | 184..36 | 745 | 100 | Minus |
| X | 23542271 | X | 16683026..16683135 | 292..183 | 550 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:43:30 has no hits.
BO27210.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:26:33 Download gff for
BO27210.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Axs-RB | 456..1220 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:33 Download gff for
BO27210.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Axs-RA | 456..1214 | 17..775 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:17:00 Download gff for
BO27210.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Axs-RA | 456..1214 | 17..775 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:17:00 Download gff for
BO27210.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16683027..16683133 | 185..291 | 100 | <- | Minus |
| X | 16683209..16683357 | 36..184 | 100 | <- | Minus |
| X | 16683422..16683440 | 17..35 | 100 | | Minus |
| X | 16681902..16682122 | 563..783 | 99 | <- | Minus |
| X | 16682201..16682471 | 292..562 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:33 Download gff for
BO27210.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16575935..16576155 | 563..783 | 99 | <- | Minus |
| arm_X | 16576234..16576504 | 292..562 | 100 | <- | Minus |
| arm_X | 16577060..16577166 | 185..291 | 100 | <- | Minus |
| arm_X | 16577242..16577390 | 36..184 | 100 | <- | Minus |
| arm_X | 16577455..16577473 | 17..35 | 100 | | Minus |
BO27210.pep Sequence
Translation from 16 to 799
> BO27210.pep
MSEDAKSPGPRTRNIIENQLFRRQRSLKLEALQRQRTLDSNDGVEGLGAD
TEPFDKTHIVIIFTEKAKLRHCQDVEKIIQEFGIQTTLEIVGKTEKYLYL
SASVDTLLRLADAAELEKMTTTHSMQKFNHGCISDFLLPGMGKEQILRYC
EIPVLIKDVIQDGIKSYVQKGYIEDMFPLHDILYLERFNWNLKRTKLPIE
DIRNYFGSSIGLYFGFIEFYTKALIFPSLFGILQYVFDLNISLVCSFYVV
WTTVSASFLDH
BO27210.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:31:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Axs-PA | 646 | CG9703-PA | 1..254 | 1..254 | 1315 | 99.6 | Plus |
