BO27243.complete Sequence
634 bp assembled on 2010-09-17
GenBank Submission: KX799946
> BO27243.complete
GAAGTTATCAGTCGACATGAAGGTCTTTGTGTGCTTGTTGGCTTCCCTGG
CTCTGGCCAACGCCGGTGGCCTCCGAGGCGGTGCAGGAGGCGGCTATCTG
CCCGGCGGAGGACGTGGTGGTGGCGGCGGAGGATTCGGTGGCCGCCCGGC
TATTGGAGCTGGCCTGGTGTCCCACGTCTCGCAGTCGCAGGGCAACACTA
AGGTCCACATTGGTGGTGGTTCCGCCGGCGGTGCTGGTGCTTATGGCGGC
GGTGCTGCCTCGTACGGCGGTGGAGCTGGTGCTGCCTATGGAGGTGGTGC
TGGAGCTTCCTACGGCGGTGGTGCAGCCTCTTATGGCGGTGGACGCGGAT
CTGGTGGATGGCAAGGAGCTGGAGCTGGAGCTGGTCGTGGTGGTGCTGGA
GGAGCTGGTGGCTGGCAAGGTGCTGGAGCAGGTCGTGGTGGAGCAGGAGG
CTGGCAGGGTGGTGCCGGAGGTGCTGGAGCTGGCAACGCCTGGGGTAACC
CCGCTGAGTTCGATTACACTGTCAACCACGCTTCCGGAGGTGCTGGTGGT
GCAGGTGGGGCCTACGGTGGTGCTGCTGGTGGTGGCTCCCGCGGCGGTGC
CGGCTGGTGGAACGATGCAAGCTTTCTAGACCAT
BO27243.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:39:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10597-RB | 603 | CG10597-PB | 1..600 | 17..616 | 3000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:39:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10597-RB | 708 | CG10597-RB | 47..646 | 17..616 | 3000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:39:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17230337..17230933 | 616..20 | 2985 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:39:37 has no hits.
BO27243.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-20 11:04:58 Download gff for
BO27243.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10597-RB | 1..600 | 17..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:36 Download gff for
BO27243.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10597-RB | 47..646 | 17..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:01:11 Download gff for
BO27243.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10597-RB | 47..646 | 17..618 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:01:11 Download gff for
BO27243.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17230335..17230935 | 17..618 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:36 Download gff for
BO27243.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17124368..17124968 | 17..618 | 99 | | Minus |
BO27243.pep Sequence
Translation from 16 to 634
> BO27243.pep
MKVFVCLLASLALANAGGLRGGAGGGYLPGGGRGGGGGGFGGRPAIGAGL
VSHVSQSQGNTKVHIGGGSAGGAGAYGGGAASYGGGAGAAYGGGAGASYG
GGAASYGGGRGSGGWQGAGAGAGRGGAGGAGGWQGAGAGRGGAGGWQGGA
GGAGAGNAWGNPAEFDYTVNHASGGAGGAGGAYGGAAGGGSRGGAGWWND
ASFLDH
BO27243.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10597-PB | 200 | CG10597-PB | 1..200 | 1..200 | 1102 | 100 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 272..460 | 14..195 | 349 | 47.3 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 272..460 | 14..195 | 349 | 47.3 | Plus |
CG17108-PA | 342 | CG17108-PA | 83..296 | 17..197 | 345 | 39.8 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 230..406 | 11..197 | 343 | 41.8 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 252..426 | 17..196 | 343 | 44 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 230..406 | 11..197 | 343 | 41.8 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 252..426 | 17..196 | 343 | 44 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 342..539 | 18..201 | 339 | 44.8 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 342..528 | 18..201 | 335 | 44.2 | Plus |
CG17108-PA | 342 | CG17108-PA | 1..220 | 1..197 | 325 | 39.1 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 318..490 | 17..195 | 324 | 44.6 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 353..521 | 17..196 | 323 | 45 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 353..542 | 17..196 | 322 | 44.4 | Plus |
CG5172-PD | 172 | CG5172-PD | 8..172 | 3..198 | 320 | 42.1 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 374..562 | 17..196 | 319 | 43.8 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 318..495 | 17..196 | 317 | 43.9 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 374..540 | 17..196 | 316 | 44.2 | Plus |
CG17108-PA | 342 | CG17108-PA | 136..326 | 16..195 | 311 | 41.4 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 388..573 | 17..196 | 308 | 43.3 | Plus |
CG17108-PA | 342 | CG17108-PA | 164..330 | 22..195 | 306 | 41.1 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 407..575 | 18..192 | 299 | 47.5 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 407..586 | 18..192 | 294 | 44.8 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 433..589 | 16..196 | 252 | 38.7 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 439..600 | 17..196 | 244 | 39.5 | Plus |
CG17108-PA | 342 | CG17108-PA | 197..342 | 10..184 | 238 | 35.7 | Plus |
CG17108-PA | 342 | CG17108-PA | 20..140 | 66..199 | 203 | 39.7 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 440..595 | 17..162 | 203 | 40.3 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 30..115 | 87..182 | 185 | 47.9 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 30..115 | 87..182 | 185 | 47.9 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 39..113 | 66..145 | 172 | 46.2 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 39..113 | 66..145 | 172 | 46.2 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 94..292 | 18..196 | 169 | 29.8 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 94..292 | 18..196 | 169 | 29.8 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 32..114 | 23..132 | 166 | 41.8 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 32..114 | 23..132 | 166 | 41.8 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 31..115 | 69..158 | 162 | 42.1 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 35..117 | 68..155 | 162 | 48.3 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 31..115 | 69..158 | 162 | 42.1 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 35..117 | 68..155 | 162 | 48.3 | Plus |
CG17108-PA | 342 | CG17108-PA | 16..118 | 73..203 | 154 | 41.2 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 32..131 | 14..132 | 147 | 39.5 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 32..131 | 14..132 | 147 | 39.5 | Plus |