Clone BO27247 Report

Search the DGRC for BO27247

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:272
Well:47
Vector:pDNR-Dual
Associated Gene/TranscriptCG14106-RA
Protein status:BO27247.pep: Imported from assembly
Sequenced Size:1045

Clone Sequence Records

BO27247.complete Sequence

1045 bp assembled on 2010-09-22

GenBank Submission: KX798247

> BO27247.complete
GAAGTTATCAGTCGACATGAAACGGGCTTCGATGGGCACATCACGCAACT
TTCTCCGCGAGAACCGGATGATGGTGAGCCAGGCGTCTCCAAACTACCAG
ATGCCCACCGCCTCGTCCATGGCCAGATGCTGCGGACCAGTGAGGTTACT
TTTGGCCGCTACTCAGAGGGGCTTGAATGGCGGAACAGGGCCAAAAGTTG
TTCCCAGTCAACGGAAGCTATCCGAGAAGCAGATTCAAACGGAGGACATC
AGCGATGAGCGGTTTCTCAGTGCCGCCCTGCTCAAGTGCTCGGAGAAGAC
TCATACCCACTTGCAATCCCGCAGCGAGGGCGACGATCCTGCGGACGGCA
GGGGAGGACAGTTTCTGGACGAAAGGCTACGACTGCGACGGACTGCGTCC
AATTTTGAGTTGGGCAAAATGCCGGAACAACGCGATGGCTATCAGCCGGG
GCAATGCACAATGCACCGGCCGTTAGCTAACACGTTCGGCATTTTGCCCG
GCGGTTTAAATTACCTGGACAATTGTGTCTCTTCCAGCCGAAAACAGGAT
GATGAGGCATCGATCTGCTCGCAATCCATCAAGGCAAGTTCTCCAAGGGT
CCGCCAAATGGACATTCCCGAGGTGGTGGATGTTAACCCAGACGATATAC
TAAGCTTACACTCGCAAGAGTCCTGTGCAGAGCTACCAGTTGTAGAGGTC
CAGCGGAATGAAGCGGAAGTCCAACTACCGGAGAATTCTCAAACGGATTC
ACCTGAGGAATCCCAACCTATTCTGCTAACCAGTGAGCAGAGAATGGTGC
TAATGGATGCCGTCCGTAAGCGGCAAAATCAATTGATTGCGGAATACAAC
CGATTGCCACTTACCGTGGGCACATTGCGAGTCCGGAATCTCAAGAGACA
ACTGGAGCAGCAATTGGATGTGTTGGACTACGATCTCAGCAGGCTATCAC
TGACGAATGTGTATTTGAAGCCAGAGTCACAATTTGGAACAATCGCTTAT
CAAAAATTGCCAACAAATATAAATGCTGCAAGCTTTCTAGACCAT

BO27247.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:55:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14106-RA 1014 CG14106-PA 1..1011 17..1027 5055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:55:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG14106-RA 1101 CG14106-RA 79..1090 16..1027 5060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:55:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13424582..13425593 1027..16 5060 100 Minus
Blast to na_te.dros performed on 2014-11-28 07:55:03 has no hits.

BO27247.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 14:38:33 Download gff for BO27247.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 77..1087 17..1029 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:59 Download gff for BO27247.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 80..1090 17..1029 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:06:50 Download gff for BO27247.complete
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 80..1090 17..1029 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:06:50 Download gff for BO27247.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13424578..13425592 17..1029 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:59 Download gff for BO27247.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13417678..13418692 17..1029 99   Minus

BO27247.pep Sequence

Translation from 16 to 1045

> BO27247.pep
MKRASMGTSRNFLRENRMMVSQASPNYQMPTASSMARCCGPVRLLLAATQ
RGLNGGTGPKVVPSQRKLSEKQIQTEDISDERFLSAALLKCSEKTHTHLQ
SRSEGDDPADGRGGQFLDERLRLRRTASNFELGKMPEQRDGYQPGQCTMH
RPLANTFGILPGGLNYLDNCVSSSRKQDDEASICSQSIKASSPRVRQMDI
PEVVDVNPDDILSLHSQESCAELPVVEVQRNEAEVQLPENSQTDSPEESQ
PILLTSEQRMVLMDAVRKRQNQLIAEYNRLPLTVGTLRVRNLKRQLEQQL
DVLDYDLSRLSLTNVYLKPESQFGTIAYQKLPTNINAASFLDH

BO27247.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14106-PA 337 CG14106-PA 1..337 1..337 1720 100 Plus