BO27270.complete Sequence
709 bp assembled on 2010-08-18
GenBank Submission: KX800095
> BO27270.complete
GAAGTTATCAGTCGACATGGAGGGGAATAGATCCCTTGTAGTGCTGGGCT
TAATACTAATTTTAATACAACTTACAACTCCAACTTCAACTCCAGCTCCA
ACTCCACAGCCTGCTGGAGCCGAAGAAGCTCCAGGAAACAGTACTGCAGA
GGCTTCCAAATCCTCCACAGCGTCTAAGTGCAAGTCAACTGAAATTCTAT
CCGAAAATGGCTGCGTGGATCGCGAAAACTTCCTCAACAAGATCGTGATG
AGATCGTGGAGGGATGAAGGCTTTGAAAAGGCGAAGGCCAGAGCTGGCCT
GGTCGATGGCGTAGAGTGCAGGGATGGGGAGTTGAGGACTGCATTTGGCT
GCTCAAAGCCACTGTACCCACCGCACGTGGACGTAAACCGGGTGCCAGTT
CACCACAGCAGACTAAATGGCGAACGGATTGTTCACGACAAGGGTATTTA
TAAACTCTATCACCACGTGGAAGATGTGGAACAAAAACCGATTCGAAAAC
CTAGAGTGGTAGGACCTCCGATAACTGGAAACAAGCGCCCACGAAAGTAC
GTATTCTTGCCGGGAAGGAGTATTGGAAAGGGACACACATGTCGGGCTAA
TGAGGTCCTGGGAAGAAGGAATCGCTGCATCCATAGGAAACGGTTAGCTG
GCCAACGACAAAATCAAACAATCGAAAACGAGCAGAGTCAAGCAAGCTTT
CTAGACCAT
BO27270.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:44:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31418-RA | 678 | CG31418-PA | 1..675 | 17..691 | 3360 | 99.9 | Plus |
CG31419-RB | 717 | CG31419-PB | 175..410 | 176..411 | 625 | 84.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31418-RA | 717 | CG31418-RA | 20..694 | 17..691 | 3360 | 99.9 | Plus |
CG31419-RB | 774 | CG31419-RB | 194..429 | 176..411 | 625 | 84.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17283814..17284488 | 17..691 | 3360 | 99.9 | Plus |
3R | 32079331 | 3R | 17284841..17285076 | 176..411 | 625 | 84.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:44:22 has no hits.
BO27270.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:38 Download gff for
BO27270.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31418-RA | 20..694 | 17..693 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:49 Download gff for
BO27270.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31418-RA | 20..694 | 17..693 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:24 Download gff for
BO27270.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31418-RA | 20..694 | 17..693 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:24 Download gff for
BO27270.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17283814..17284488 | 17..693 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:49 Download gff for
BO27270.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13109536..13110210 | 17..693 | 99 | | Plus |
BO27270.pep Sequence
Translation from 16 to 709
> BO27270.pep
MEGNRSLVVLGLILILIQLTTPTSTPAPTPQPAGAEEAPGNSTAEASKSS
TASKCKSTEILSENGCVDRENFLNKIVMRSWRDEGFEKAKARAGLVDGVE
CRDGELRTAFGCSKPLYPPHVDVNRVPVHHSRLNGERIVHDKGIYKLYHH
VEDVEQKPIRKPRVVGPPITGNKRPRKYVFLPGRSIGKGHTCRANEVLGR
RNRCIHRKRLAGQRQNQTIENEQSQASFLDH
BO27270.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:25:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31418-PA | 225 | CG31418-PA | 1..225 | 1..225 | 1189 | 100 | Plus |
CG31419-PB | 238 | CG31419-PB | 30..217 | 22..212 | 508 | 55 | Plus |