BO27286.complete Sequence
232 bp assembled on 2012-04-24
> BO27286.complete
GAAGTTATCAGTCGACATGACACGCGGCAACCAACGAGACCTGGCCCGCC
AGAAGAACCAGAAGAAGCAGGCGGATTTGACCAAGGGAAAGCGAACCGAT
AACCTCACCGTGGAGCAAAGGAAGGCCAGGGACGCTGAGTTAATGCGGGA
GAAGCAGAAAAAAAAGGAAGAGGCCGCTGCGGCGGGCACAAGCAAAGCAA
GCTTTCTAGACCATTCGTTTGGCGCTAAAGGG
BO27286.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:22:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17931-RD | 183 | CG17931-PD | 1..180 | 17..196 | 900 | 100 | Plus |
CG17931-RC | 183 | CG17931-PC | 1..180 | 17..196 | 900 | 100 | Plus |
CG17931-RA | 183 | CG17931-PA | 1..180 | 17..196 | 900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17931-RD | 1367 | CG17931-RD | 178..357 | 17..196 | 900 | 100 | Plus |
CG17931-RC | 1081 | CG17931-RC | 178..357 | 17..196 | 900 | 100 | Plus |
CG17931-RA | 762 | CG17931-RA | 178..357 | 17..196 | 900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16358682..16358788 | 130..24 | 535 | 100 | Minus |
3R | 32079331 | 3R | 16358545..16358614 | 196..127 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:22:35 has no hits.
BO27286.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:02:31 Download gff for
BO27286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17931-RA | 176..355 | 17..196 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:11 Download gff for
BO27286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17931-RA | 178..357 | 17..196 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:09:49 Download gff for
BO27286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17931-RA | 178..357 | 17..196 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:09:49 Download gff for
BO27286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16358545..16358611 | 130..196 | 100 | <- | Minus |
3R | 16358683..16358792 | 17..129 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:11 Download gff for
BO27286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12184267..12184333 | 130..196 | 100 | <- | Minus |
arm_3R | 12184405..12184514 | 17..129 | 96 | | Minus |
BO27286.pep Sequence
Translation from 16 to 232
> BO27286.pep
MTRGNQRDLARQKNQKKQADLTKGKRTDNLTVEQRKARDAELMREKQKKK
EEAAAAGTSKASFLDHSFGAKG
BO27286.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17931-PD | 60 | CG17931-PD | 1..60 | 1..60 | 296 | 100 | Plus |
CG17931-PC | 60 | CG17931-PC | 1..60 | 1..60 | 296 | 100 | Plus |
CG17931-PA | 60 | CG17931-PA | 1..60 | 1..60 | 296 | 100 | Plus |