BO27309.complete Sequence
1150 bp assembled on 2010-08-18
GenBank Submission: KX793967
> BO27309.complete
GAAGTTATCAGTCGACATGAAAAAGCAAATCGTAAGGGAGTTCATAACCG
TAAAGAAGGTACTTCACCTGCCGCCGGAGCCACCCCCACCGCCGCCACCT
CCTAAGCGCCACGTTCTGGCTGTGGGCAGCTGCACCCTGGACATGATCAC
CATCGTGGATCTGCCTCTTTTTCCAGGCCAGGTGCAACGCACCACGGAGG
GAAGCTGGCGGCGCGGCGGTCCCGCTGCCAATATATGCACTGTGTGGCGG
CGACTGGGCTTGGAGTGCGAATTCCTCGGAGTTTTGAGCAGGGTTAGGGC
GTTCGAGAGCCTGTTGAATGGATTTCAATCGCAGGGAATCGACATTTCGC
ATTGCCCGCTGACGAATCACCGGCCTGCGCACCGCAGCATCATTGTCCAA
CGTAACGTGGATACGCGAACCATGCTCGAGTTCGCCAATGCCAACCAGGA
GCTCACCTACCAGCAGTTTGTGGGCGCCGTGGACTACCAGAAGTACTCGT
GGATACACTTCGAATGTCGTAATCCCGTTGAGATGCTGCGCATGGTCCTG
GCGGTCATACAATTCAACGAGCGCTGCCCCGAGTCAAGGATCACACTCTC
TGTGGATCTGGACAACTTGCGACCGGCCACCATGTTGATGGCCAGTATGG
TGGACTACGTCTTCGCCCGAAAGACCATGATGCGTACGTACTGTTTTATG
AATGGACGCGAGGTTGTTTGGGCGATTAGGAATGAAATGCGAAGAGCACG
GACTCAATGGGAAAAAAGCCAGCCCAAAAAGATGCCCTATCTACCTCCTG
ATCCCCCAGATGAGCATTCCAACGGATATTGCCCGGGACCGCTGAATAAC
CAACCCGTCGTCATATACAATAATTATATGGAAGGCGCCAGTTGCCTGAT
GGCCGACGACACCTACTTCAAGGTGGGCTCCCAGATTCCGCCCAAATTAG
TGGACGTTGTGGCCGTTAACGACACCTTCTCGGCGGCCGTGATATATGCA
CTGATTAAGGTCAAGATGCGGCTGAGGGATGCCATCGAGTACGGAACCCG
GGCGTCGTCTCTGAAGTTGACGGGAAACGGATTCGATGTGCTGCGGTGTA
TGCCCAAAGATCTGATTGGTTGTTACTATACTGCAAGCTTTCTAGACCAT
BO27309.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:54:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7335-RA | 1119 | CG7335-PA | 1..1116 | 17..1132 | 5580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:54:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7335-RA | 1237 | CG7335-RA | 11..1126 | 17..1132 | 5580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:54:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20132143..20133258 | 1132..17 | 5580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:54:46 has no hits.
BO27309.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:52:34 Download gff for
BO27309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7335-RA | 11..1126 | 17..1134 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:28 Download gff for
BO27309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7335-RA | 11..1126 | 17..1134 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:19 Download gff for
BO27309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7335-RA | 11..1126 | 17..1134 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:19 Download gff for
BO27309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20132141..20133258 | 17..1134 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:28 Download gff for
BO27309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20125241..20126358 | 17..1134 | 99 | | Minus |
BO27309.pep Sequence
Translation from 16 to 1150
> BO27309.pep
MKKQIVREFITVKKVLHLPPEPPPPPPPPKRHVLAVGSCTLDMITIVDLP
LFPGQVQRTTEGSWRRGGPAANICTVWRRLGLECEFLGVLSRVRAFESLL
NGFQSQGIDISHCPLTNHRPAHRSIIVQRNVDTRTMLEFANANQELTYQQ
FVGAVDYQKYSWIHFECRNPVEMLRMVLAVIQFNERCPESRITLSVDLDN
LRPATMLMASMVDYVFARKTMMRTYCFMNGREVVWAIRNEMRRARTQWEK
SQPKKMPYLPPDPPDEHSNGYCPGPLNNQPVVIYNNYMEGASCLMADDTY
FKVGSQIPPKLVDVVAVNDTFSAAVIYALIKVKMRLRDAIEYGTRASSLK
LTGNGFDVLRCMPKDLIGCYYTASFLDH
BO27309.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:20:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7335-PA | 372 | CG7335-PA | 1..372 | 1..372 | 1989 | 100 | Plus |
CG7328-PA | 306 | CG7328-PA | 5..297 | 31..357 | 348 | 27.5 | Plus |
CG12289-PA | 378 | CG12289-PA | 13..319 | 33..367 | 321 | 27.1 | Plus |
CG7551-PB | 322 | CG7551-PB | 14..311 | 30..357 | 290 | 26.8 | Plus |