BO27320.complete Sequence
400 bp assembled on 2010-08-18
GenBank Submission: KX795008
> BO27320.complete
GAAGTTATCAGTCGACATGCTCACCAGACAACCCGACTACACCATCTCCG
AGCTGGGCCATCCCATCCATCAGTGGTCGGATTCGACCGCGTGCGAGTCC
CTCAAGAAGCTGGACTACACAAAGATGCCCAGTTCTCCGCCATCACCACA
TCGCCTGCTGCCACTGAGGGAAACGTTGGACGATTGTTTCAAGCGCTTGA
CGATGAGGAGCAGAGAAGATTTCGAAGAGGATCCCGTATACCAGCAGAAA
TTGAGAAAGAATCAGTGCAATGAACAGCAGCGAAGGCGCAATCAAAAATG
TCGAGATAAAGCCCAGTCCGGAGCAACAACGACGACGACGACGACGACAA
CGATAGCGGCGAGCTGCGATTTAAACAATTTCGCAAGCTTTCTAGACCAT
BO27320.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:32:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31710-RC | 369 | CG31710-PC | 1..366 | 17..382 | 1830 | 100 | Plus |
CG31710-RA | 369 | CG31710-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
CG31710-RD | 372 | CG31710-PD | 1..369 | 17..382 | 1765 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:32:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31710-RC | 795 | CG31710-RC | 309..674 | 17..382 | 1830 | 100 | Plus |
CG31710-RA | 728 | CG31710-RA | 242..607 | 17..382 | 1830 | 100 | Plus |
CG31710-RD | 1253 | CG31710-RD | 242..610 | 17..382 | 1765 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:32:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9703268..9703539 | 288..17 | 1360 | 100 | Minus |
2L | 23513712 | 2L | 9703085..9703179 | 382..288 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:32:43 has no hits.
BO27320.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:52 Download gff for
BO27320.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31710-RA | 232..597 | 17..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:31 Download gff for
BO27320.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31710-RA | 242..607 | 17..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:39 Download gff for
BO27320.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31710-RA | 242..607 | 17..384 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:39 Download gff for
BO27320.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9703082..9703178 | 289..384 | 97 | <- | Minus |
2L | 9703268..9703539 | 17..288 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:31 Download gff for
BO27320.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9703082..9703178 | 289..384 | 97 | <- | Minus |
arm_2L | 9703268..9703539 | 17..288 | 100 | | Minus |
BO27320.pep Sequence
Translation from 16 to 400
> BO27320.pep
MLTRQPDYTISELGHPIHQWSDSTACESLKKLDYTKMPSSPPSPHRLLPL
RETLDDCFKRLTMRSREDFEEDPVYQQKLRKNQCNEQQRRRNQKCRDKAQ
SGATTTTTTTTTIAASCDLNNFASFLDH
BO27320.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:10:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31710-PC | 122 | CG31710-PC | 1..122 | 1..122 | 656 | 100 | Plus |
CG31710-PA | 122 | CG31710-PA | 1..122 | 1..122 | 656 | 100 | Plus |
CG31710-PD | 123 | CG31710-PD | 1..123 | 1..122 | 644 | 99.2 | Plus |