BO27325.complete Sequence
433 bp assembled on 2010-08-18
GenBank Submission: KX799002
> BO27325.complete
GAAGTTATCAGTCGACATGGAATCAGCCGTACGAAAGCGCAGAGTTCCCT
TTCTCCAGGACAATAGACATTCCGATAAACGGACATGCAACTTGTCAACA
ATATCACCTCGCAGCACTCTAGTTCAAACAGTAAAGAAACCCGTCAAGAA
GTTCTCTTCGGATTTAGCCAATCTTCCACCGGTTCCCGCAATCGATGCTT
TTGAGCGAGGCTACCAAGTGGAATCGATATTGGACATGGTACAAAACATC
CACAAGGAGCAATTCCTCTACATAAAGTTTACGAATCTCATTGAACCCGA
GTTGGTTCCTTTGGAACTGGCCTTACAGCATGTTCCACACCTGCTTTCTG
ATTTCTACAAGGAATACGTCCAGGCCTGGCAGAAAATGGAACAACAGAAG
TATGATGAATCTCCTGCAAGCTTTCTAGACCAT
BO27325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:55:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Skadu-RA | 402 | CG42448-PA | 1..399 | 17..415 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Skadu-RA | 670 | CG42448-RA | 47..445 | 17..415 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15547668..15548018 | 65..415 | 1755 | 100 | Plus |
2L | 23513712 | 2L | 15547565..15547612 | 17..64 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:55:54 has no hits.
BO27325.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:55 Download gff for
BO27325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42448-RA | 1..399 | 17..417 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:38:59 Download gff for
BO27325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Skadu-RA | 47..445 | 17..417 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:13:53 Download gff for
BO27325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Skadu-RA | 47..445 | 17..417 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:13:53 Download gff for
BO27325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15547565..15547612 | 17..64 | 100 | -> | Plus |
2L | 15547668..15548018 | 65..417 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:38:59 Download gff for
BO27325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15547565..15547612 | 17..64 | 100 | -> | Plus |
arm_2L | 15547668..15548018 | 65..417 | 99 | | Plus |
BO27325.pep Sequence
Translation from 16 to 433
> BO27325.pep
MESAVRKRRVPFLQDNRHSDKRTCNLSTISPRSTLVQTVKKPVKKFSSDL
ANLPPVPAIDAFERGYQVESILDMVQNIHKEQFLYIKFTNLIEPELVPLE
LALQHVPHLLSDFYKEYVQAWQKMEQQKYDESPASFLDH
BO27325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:04:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Skadu-PA | 133 | CG42448-PA | 1..133 | 1..133 | 689 | 100 | Plus |