BO27327.complete Sequence
673 bp assembled on 2010-08-18
GenBank Submission: KX794545
> BO27327.complete
GAAGTTATCAGTCGACATGCATCGCGAAAACGCCTACAGCAAGGAGGCCG
AGCTGAAGAATCTGGCCAAACGCGAGTTGGCCAACGGGTTGGACAAGGAT
CCAATTTACAAATTGCGCCTGCAGTGCTTCAGTCGCGGTGCCACCGGCAT
CTTGGGCCTGTCCAGATCATTCCGGGTGATGGACGACGATGGCAGCAAAT
CTCTCAGTCCCGAGGAGTTCAAAAAAGGAGTCACGGATATCGGCCTGGAC
CTGACTGATTCCGAAATCGATGAAATGTTCTCCAGATTCGACACAGATGG
AAGTGGCAATATTAATATGACAGAATTCCTAGTAAAGCTGCGTCCTCCTA
TGAATAATTCGCGTATCAGTATCATCGAAAAGGCCTTCGATAAGATGGAT
GCCAATGGCGATGGCCAAATTACTGTCACCGATTTGAAGAATGTATATTC
GGTGCGCGATCATCCGAAATACTTAAGTGGCGAGATGACGGAAAACCAGA
TATTCACGCAGTTCCTGAAAAACTTCGAGGTGGGTGCTCCAAATCCGGAT
GGCATCGTAACCAGGGAGGAATTTATCAACTACTATGCCACGATCAGCGC
CTCGATCGATAACGACGCTTATTTTGATCTTATGATGAGACAAGCCTACA
AACTCGCAAGCTTTCTAGACCAT
BO27327.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:33:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31345-RA | 642 | CG31345-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
CG10126-RB | 684 | CG10126-PB | 117..247 | 91..221 | 190 | 76.3 | Plus |
CG10126-RA | 648 | CG10126-PA | 81..211 | 91..221 | 190 | 76.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31345-RA | 984 | CG31345-RA | 143..781 | 17..655 | 3195 | 100 | Plus |
CG10126-RB | 835 | CG10126-RB | 146..276 | 91..221 | 190 | 76.3 | Plus |
CG10126-RA | 907 | CG10126-RA | 218..348 | 91..221 | 190 | 76.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12811348..12811659 | 655..344 | 1560 | 100 | Minus |
3R | 32079331 | 3R | 12813773..12813921 | 165..17 | 745 | 100 | Minus |
3R | 32079331 | 3R | 12811950..12812074 | 285..161 | 625 | 100 | Minus |
3R | 32079331 | 3R | 12811720..12811781 | 343..282 | 310 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:33:04 has no hits.
BO27327.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:58 Download gff for
BO27327.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31345-RA | 143..781 | 17..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:40 Download gff for
BO27327.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31345-RA | 143..781 | 17..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:47 Download gff for
BO27327.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31345-RA | 143..781 | 17..657 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:47 Download gff for
BO27327.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12811346..12811659 | 344..657 | 99 | <- | Minus |
3R | 12811720..12811777 | 286..343 | 100 | <- | Minus |
3R | 12811950..12812069 | 166..285 | 100 | <- | Minus |
3R | 12813773..12813921 | 17..165 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:40 Download gff for
BO27327.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8637068..8637381 | 344..657 | 99 | <- | Minus |
arm_3R | 8637442..8637499 | 286..343 | 100 | <- | Minus |
arm_3R | 8637672..8637791 | 166..285 | 100 | <- | Minus |
arm_3R | 8639495..8639643 | 17..165 | 100 | | Minus |
BO27327.pep Sequence
Translation from 16 to 673
> BO27327.pep
MHRENAYSKEAELKNLAKRELANGLDKDPIYKLRLQCFSRGATGILGLSR
SFRVMDDDGSKSLSPEEFKKGVTDIGLDLTDSEIDEMFSRFDTDGSGNIN
MTEFLVKLRPPMNNSRISIIEKAFDKMDANGDGQITVTDLKNVYSVRDHP
KYLSGEMTENQIFTQFLKNFEVGAPNPDGIVTREEFINYYATISASIDND
AYFDLMMRQAYKLASFLDH
BO27327.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:05:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31345-PA | 213 | CG31345-PA | 1..213 | 1..213 | 1097 | 100 | Plus |
CG10126-PA | 215 | CG10126-PA | 9..213 | 7..211 | 713 | 66.3 | Plus |
CG10126-PB | 227 | CG10126-PB | 21..225 | 7..211 | 713 | 66.3 | Plus |
CG11165-PA | 148 | CG11165-PA | 15..143 | 51..188 | 140 | 25.2 | Plus |