BO27332.complete Sequence
313 bp assembled on 2010-08-18
GenBank Submission: KX793912
> BO27332.complete
GAAGTTATCAGTCGACATGAAGTTCTTCATTTTGATTTCATTCTTACTGG
TCTGTCAAGGGTCCAACGAAGAGGAGGATAACATAATAGCCGAGTTGTGC
TTCAATCCGAATTCTGGACCTCCTTGCCAGAAATTAAAAACATATTATTG
GGATAAGGAAAAGAATCGATGCGTGCTCTCTCGGTATTTAATGCAGCCTT
GTGGTTTCTTTGACACAATAGACATGTGCGATAAAATATGCACCAAGGAA
TCGTGGACAATATCTCATTTGGAAGTATATGTTCGAAATATGCCTGCAAG
CTTTCTAGACCAT
BO27332.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:33:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp33A1-RA | 282 | CG42472-PA | 1..279 | 17..295 | 1395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp33A1-RA | 359 | CG42472-RA | 20..302 | 13..295 | 1400 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11754142..11754345 | 295..92 | 1020 | 100 | Minus |
2L | 23513712 | 2L | 11754404..11754483 | 92..13 | 385 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:33:25 has no hits.
BO27332.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:03 Download gff for
BO27332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp33A1-RA | 24..302 | 17..297 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:50 Download gff for
BO27332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp33A1-RA | 24..302 | 17..297 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:53 Download gff for
BO27332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp33A1-RA | 24..302 | 17..297 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:53 Download gff for
BO27332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11754140..11754344 | 93..297 | 99 | <- | Minus |
2L | 11754404..11754479 | 17..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:50 Download gff for
BO27332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11754404..11754479 | 17..92 | 100 | | Minus |
arm_2L | 11754140..11754344 | 93..297 | 99 | <- | Minus |
BO27332.pep Sequence
Translation from 16 to 313
> BO27332.pep
MKFFILISFLLVCQGSNEEEDNIIAELCFNPNSGPPCQKLKTYYWDKEKN
RCVLSRYLMQPCGFFDTIDMCDKICTKESWTISHLEVYVRNMPASFLDH
BO27332.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:05:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp33A1-PA | 93 | CG42472-PA | 1..93 | 1..93 | 520 | 100 | Plus |