BO27334.complete Sequence
364 bp assembled on 2010-08-18
GenBank Submission: KX794765
> BO27334.complete
GAAGTTATCAGTCGACATGAAATTCGTGATATTGCTATCCTTGATGTGCA
TCGGAATTGGTTATGCCCAACAACAGTCGGAAGTCAAATGCTTCATGGAC
GCCATTCCTGTGGGCGAATGTGGTAGTCGGATTATAGGGTATAGCTATTC
GAGTGTAAGAGCCCGTTGCGTAAACTATGAGACCATAGGTTGCGAGGTCA
TCGGAAATTTCTTCACCGACAGGAAAGTGTGTGAGGCCAAATGCAAACCG
CCGATCAGTTTTAGAAACAATCCATTCAGTTATTATTTCGAAAGAGCTTT
TAACCAGGCCCGCGATACTTTAAGAAGAATATTCAATCTACCTCAGGCAA
GCTTTCTAGACCAT
BO27334.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:33:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Bb-RA | 333 | CG42462-PA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Bb-RA | 456 | CG42462-RA | 67..396 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3669321..3669585 | 346..82 | 1325 | 100 | Minus |
2L | 23513712 | 2L | 3669643..3669709 | 83..17 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:33:35 has no hits.
BO27334.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:05 Download gff for
BO27334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 9..338 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:55 Download gff for
BO27334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 67..396 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:57 Download gff for
BO27334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Bb-RA | 67..396 | 17..348 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:57 Download gff for
BO27334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3669319..3669583 | 84..348 | 99 | <- | Minus |
2L | 3669643..3669709 | 17..83 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:55 Download gff for
BO27334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3669319..3669583 | 84..348 | 99 | <- | Minus |
arm_2L | 3669643..3669709 | 17..83 | 100 | | Minus |
BO27334.pep Sequence
Translation from 16 to 364
> BO27334.pep
MKFVILLSLMCIGIGYAQQQSEVKCFMDAIPVGECGSRIIGYSYSSVRAR
CVNYETIGCEVIGNFFTDRKVCEAKCKPPISFRNNPFSYYFERAFNQARD
TLRRIFNLPQASFLDH
BO27334.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:05:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Bb-PA | 110 | CG42462-PA | 1..110 | 1..110 | 589 | 100 | Plus |
CG42463-PB | 111 | CG42463-PB | 13..97 | 7..97 | 148 | 35.2 | Plus |