BO27335.complete Sequence
505 bp assembled on 2010-08-18
GenBank Submission: KX794403
> BO27335.complete
GAAGTTATCAGTCGACATGTTCAAAAACCACTTGGAAATGATTGGGCGCA
ATGAGAGCCCCAGCAAGAAGGCGAAATTCTGGCAGTCCTACATCAGGTCC
CTGAAGGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCG
TCCCTACAGCTCCTACCTGGACTCGCCCTCCTACAGGAGCATCTATGACG
AGCCCGCCACCGCCAATGAGCGCGTCCAGTCCTCTGGCTACAGATATCTG
CCAGTGAGCCGCGACACATACGGCTACTCGCCCCGTGCCATCTACGATCA
TCACTACAGCCGAACAAAGAAGGCCTGGAATGATCATCTGAAGCGCATGC
AGGAGATCGAGCGCAGGTACCCATCTCGCTATGGTCTCTACTTGAGGGAC
AAGCCACTCACGCCCAACTCGCTGGTGCCCCTGGAGTACGAGCCAGAGGA
CAAGCTGCTGGCTGAGCTCAACAAGGCTATAAGAGTTGCAAGCTTTCTAG
ACCAT
BO27335.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:33:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mf-RN | 474 | CG6803-PN | 1..471 | 17..487 | 2340 | 99.8 | Plus |
Mf-RG | 474 | CG6803-PG | 1..471 | 17..487 | 2340 | 99.8 | Plus |
Mf-RA | 474 | CG6803-PA | 1..471 | 17..487 | 2340 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mf-RN | 814 | CG6803-RN | 116..586 | 17..487 | 2340 | 99.8 | Plus |
Mf-RG | 879 | CG6803-RG | 181..651 | 17..487 | 2340 | 99.8 | Plus |
Mf-RA | 813 | CG6803-RA | 115..585 | 17..487 | 2340 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15178280..15178490 | 317..107 | 1040 | 99.5 | Minus |
3R | 32079331 | 3R | 15176184..15176295 | 476..365 | 560 | 100 | Minus |
3R | 32079331 | 3R | 15179038..15179129 | 108..17 | 460 | 100 | Minus |
3R | 32079331 | 3R | 15176362..15176412 | 368..318 | 255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:33:40 has no hits.
BO27335.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:06 Download gff for
BO27335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mf-RA | 120..585 | 22..489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:57 Download gff for
BO27335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mf-RA | 120..585 | 22..489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:59 Download gff for
BO27335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mf-RA | 120..585 | 22..489 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:59 Download gff for
BO27335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15176177..15176293 | 367..484 | 97 | <- | Minus |
3R | 15176364..15176412 | 318..366 | 100 | <- | Minus |
3R | 15178280..15178489 | 108..317 | 99 | <- | Minus |
3R | 15179039..15179124 | 22..107 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:57 Download gff for
BO27335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11001899..11002015 | 367..484 | 97 | <- | Minus |
arm_3R | 11002086..11002134 | 318..366 | 100 | <- | Minus |
arm_3R | 11004002..11004211 | 108..317 | 99 | <- | Minus |
arm_3R | 11004761..11004846 | 22..107 | 100 | | Minus |
BO27335.pep Sequence
Translation from 16 to 505
> BO27335.pep
MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSY
LDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRT
KKAWNDHLKRMQEIERRYPSRYGLYLRDKPLTPNSLVPLEYEPEDKLLAE
LNKAIRVASFLDH
BO27335.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:05:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mf-PN | 157 | CG6803-PN | 1..157 | 1..157 | 835 | 100 | Plus |
Mf-PG | 157 | CG6803-PG | 1..157 | 1..157 | 835 | 100 | Plus |
Mf-PA | 157 | CG6803-PA | 1..157 | 1..157 | 835 | 100 | Plus |
Mf-PI | 230 | CG6803-PI | 1..166 | 1..159 | 808 | 94 | Plus |
Mf-PE | 166 | CG6803-PE | 1..163 | 1..156 | 802 | 94.5 | Plus |