BO27340.complete Sequence
652 bp assembled on 2010-08-18
GenBank Submission: KX795051
> BO27340.complete
GAAGTTATCAGTCGACATGACCAAGGGCGTGAGGATTTGCAACGATGGAT
TGCCTGGTTTGCCGAATGAAAGGCCATATTCCCGAAGAACTTTAGATACG
CGGCAAAAGACTCAGAAGATGTCCTCCAGGCCATCTAGGAAACCATTGCA
GTCTCTACAAACTGTCGGTCGGAATACGAGTTCCAGCCTGAAGCGCATAG
GAAGTCCGATCTCCGAGGAAGAATTTGGTGTCCTGGTGCAGCAGGATTGT
AAGGCAGAGCAGCATCACACCGATCGCCAAAACCTGGCGGACATAATCCT
TATGCAGGCCCGTCGCATCGAGAAGCAGCAGCGGGAGATGAAAAGAATAA
AGGCGCACTATGAGCGCCAGGTGTCCACCATCAAGAACAATGCCATCATG
CTGGAGTCGCATCTGCAAAAGGTGCTGGCCAGTGTCGAAAGGGATCGGGC
CAAGCGGATTGGCCACCACTGCCAGGACATGCTCGGTGCCGTGGAGAAGC
TGCAAAGGAGCGACATCCAAGTGAAGCCGCAATCTTCGGCCAACCAATTG
CTGATCCAGTATCTTCACTCCAAGAAAATTTCGCATTCGACCAAGAAGTC
CAATGAAAACACAAGTAGGTACAGGAATATGTTGGCAAGCTTTCTAGACC
AT
BO27340.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:33:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6333-RB | 621 | CG6333-PB | 1..618 | 17..634 | 3090 | 100 | Plus |
CG6333-RA | 621 | CG6333-PA | 1..618 | 17..634 | 3090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6333-RB | 2133 | CG6333-RB | 1397..2014 | 17..634 | 3090 | 100 | Plus |
CG6333-RA | 1028 | CG6333-RA | 296..913 | 17..634 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17480248..17480865 | 634..17 | 3090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:33:51 has no hits.
BO27340.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:10 Download gff for
BO27340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6333-RA | 74..691 | 17..636 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:01 Download gff for
BO27340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6333-RA | 296..913 | 17..636 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:03 Download gff for
BO27340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6333-RA | 296..913 | 17..636 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:03 Download gff for
BO27340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17480245..17480865 | 17..636 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:01 Download gff for
BO27340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17473345..17473965 | 17..636 | 99 | | Minus |
BO27340.pep Sequence
Translation from 16 to 652
> BO27340.pep
MTKGVRICNDGLPGLPNERPYSRRTLDTRQKTQKMSSRPSRKPLQSLQTV
GRNTSSSLKRIGSPISEEEFGVLVQQDCKAEQHHTDRQNLADIILMQARR
IEKQQREMKRIKAHYERQVSTIKNNAIMLESHLQKVLASVERDRAKRIGH
HCQDMLGAVEKLQRSDIQVKPQSSANQLLIQYLHSKKISHSTKKSNENTS
RYRNMLASFLDH
BO27340.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:05:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6333-PB | 206 | CG6333-PB | 1..206 | 1..206 | 1045 | 100 | Plus |
CG6333-PA | 206 | CG6333-PA | 1..206 | 1..206 | 1045 | 100 | Plus |