BO27345.complete Sequence
697 bp assembled on 2010-08-18
> BO27345.complete
GAAGTTATCAGTCGACATGTCGGTGCCAATCCGCTTTCGCAGTCGACGAG
TTGGAGCTGCGCAAGAACCACCAAGAGCTGCCCGCAAAGACATGACTACA
TGCAGTGTGACCAGCACACCAGCGCGGTTTGCCCGCTGCCTGGCTAACTT
CCAGGTGGACGAGCTGCTGCTGTTAAAGAAGTCCGTGATGAGTATGGAGG
CGCTGGATAAGAACGATAGTCTCCAGCCGACTACGGAATGCCCACAGATG
GCGCCGGATGGATCGCCACTGCCAGAGCGAATGGCCTTGATGGCCGCAGA
TCGGGGTGAGCACGACACCACTGGCTCCCATGGTCCCTGGCACTCCCATC
CACACGCGCCGACTTCCTGGACCGAGGAAAAGCCCTCAAAGTTGCAGACC
CTATTCCAGATCAGCATTACGGCCCTGGCCTTTCTCTCCTTCGGCGGCTA
TCTACTCTGCCTAATCGTGCAGGCCATCAAGAGCAAGGGCACCACCTACT
TCCATCCGGTGGCCACGGCCACGACCAGCTCATCCACAAGCAATGTGAAA
CGCATCAAGATATACCGCCGCAGCAAGCGCAGCTCTGTGCGCCCCGATAC
CGATCTGCCAACCCTGCTGCAGCAGGACTACGCCTCCTACATGAAATCTT
TGCGAGATCGCGGCTGGGGCATGCTTACCGCAAGCTTTCTAGACCAT
BO27345.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14797-RC | 666 | CG14797-PC | 1..663 | 17..679 | 3315 | 100 | Plus |
| CG14797-RB | 591 | CG14797-PB | 1..588 | 92..679 | 2940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14797-RC | 3151 | CG14797-RC | 2051..2713 | 17..679 | 3315 | 100 | Plus |
| CG14797-RB | 1470 | CG14797-RB | 370..1032 | 17..679 | 3315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1684077..1684453 | 303..679 | 1885 | 100 | Plus |
| X | 23542271 | X | 1683828..1684025 | 107..304 | 990 | 100 | Plus |
| X | 23542271 | X | 1683670..1683760 | 17..107 | 455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:34:09 has no hits.
BO27345.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:13 Download gff for
BO27345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14797-RB | 1..588 | 92..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:07 Download gff for
BO27345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14797-RB | 370..1032 | 17..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:07 Download gff for
BO27345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14797-RB | 370..1032 | 17..681 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:07 Download gff for
BO27345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1683670..1683760 | 17..107 | 100 | -> | Plus |
| X | 1683829..1684024 | 108..303 | 100 | -> | Plus |
| X | 1684078..1684453 | 304..681 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:07 Download gff for
BO27345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1577703..1577793 | 17..107 | 100 | -> | Plus |
| arm_X | 1577862..1578057 | 108..303 | 100 | -> | Plus |
| arm_X | 1578111..1578486 | 304..681 | 99 | | Plus |
BO27345.pep Sequence
Translation from 16 to 697
> BO27345.pep
MSVPIRFRSRRVGAAQEPPRAARKDMTTCSVTSTPARFARCLANFQVDEL
LLLKKSVMSMEALDKNDSLQPTTECPQMAPDGSPLPERMALMAADRGEHD
TTGSHGPWHSHPHAPTSWTEEKPSKLQTLFQISITALAFLSFGGYLLCLI
VQAIKSKGTTYFHPVATATTSSSTSNVKRIKIYRRSKRSSVRPDTDLPTL
LQQDYASYMKSLRDRGWGMLTASFLDH
BO27345.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14797-PC | 221 | CG14797-PC | 1..221 | 1..221 | 1150 | 100 | Plus |
| CG14797-PB | 196 | CG14797-PB | 1..196 | 26..221 | 1025 | 100 | Plus |
