BO27346.complete Sequence
466 bp assembled on 2010-08-18
GenBank Submission: KX795858
> BO27346.complete
GAAGTTATCAGTCGACATGGGAAAAAGTGAGAAAAAATCAAAGAAAAAGC
ATAAGGAGAAGCGCAGGGAACACAAGGAAAAGCACAAGTCAAAGAAATCC
AAGAAACACAACCGAAAAAAGGAAGAATCTCCGCCGATAGCTTCACCAAC
ACCAATACAGCCTGAAAGGGTCAACCAGGAGGAGGAGGATGACTTTGCCA
TACCAATAGCACTGATGAATAGCAAATCACATGCCCCGGAAACTCCAGAG
GAATACCAGCGCCGTCAGAGCCAGATCCGCAAAGAGGTGGACCCGGTGAC
GGGTCGCGTCCGGCTCATCAAAGGCGACAGTGAGGTGCTGGAAGAGATTG
TGACCAAAGAGCGCCACCTGGAGATCAACAAGAAGGCCACCCGCGGTGAT
GGAGAGTTCTACGAAGCCAGATCTCTGGACGCCGCCAAGCGTCGCAAAGC
AAGCTTTCTAGACCAT
BO27346.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18428-RA | 435 | CG18428-PA | 1..432 | 17..448 | 2160 | 100 | Plus |
| CG18428-RC | 237 | CG18428-PC | 1..234 | 215..448 | 1170 | 100 | Plus |
| CG18428-RB | 201 | CG18428-PB | 1..193 | 17..209 | 965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18428-RA | 577 | CG18428-RA | 30..461 | 17..448 | 2160 | 100 | Plus |
| CG18428-RB | 644 | CG18428-RB | 288..528 | 208..448 | 1205 | 100 | Plus |
| CG18428-RC | 523 | CG18428-RC | 167..407 | 208..448 | 1205 | 100 | Plus |
| CG18428-RB | 644 | CG18428-RB | 30..222 | 17..209 | 965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24109654..24109894 | 208..448 | 1205 | 100 | Plus |
| 3R | 32079331 | 3R | 24109396..24109588 | 17..209 | 965 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:34:15 has no hits.
BO27346.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:14 Download gff for
BO27346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18428-RA | 16..447 | 17..450 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:09 Download gff for
BO27346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18428-RA | 30..461 | 17..450 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:10 Download gff for
BO27346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18428-RA | 30..461 | 17..450 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:10 Download gff for
BO27346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24109396..24109588 | 17..209 | 100 | -> | Plus |
| 3R | 24109656..24109894 | 210..450 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:09 Download gff for
BO27346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19935118..19935310 | 17..209 | 100 | -> | Plus |
| arm_3R | 19935378..19935616 | 210..450 | 99 | | Plus |
BO27346.pep Sequence
Translation from 16 to 466
> BO27346.pep
MGKSEKKSKKKHKEKRREHKEKHKSKKSKKHNRKKEESPPIASPTPIQPE
RVNQEEEDDFAIPIALMNSKSHAPETPEEYQRRQSQIRKEVDPVTGRVRL
IKGDSEVLEEIVTKERHLEINKKATRGDGEFYEARSLDAAKRRKASFLDH
BO27346.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18428-PA | 144 | CG18428-PA | 1..144 | 1..144 | 739 | 100 | Plus |
| CG18428-PC | 78 | CG18428-PC | 1..78 | 67..144 | 394 | 100 | Plus |
| CG18428-PB | 66 | CG18428-PB | 1..64 | 1..64 | 337 | 100 | Plus |
