BO27350.complete Sequence
430 bp assembled on 2010-08-18
GenBank Submission: KX798452
> BO27350.complete
GAAGTTATCAGTCGACATGAGGAAATCACTACTGATCGTTGGCTCCCTCC
TGGTGACCATCTTTCTGGCCCATCTGCCAGTTGGTCTAGCCGTCTCGTGT
GCCGATGATCCCACCGATACGGCTTGCATCGATTGCACAGATACCGCGAA
TGCAGCTGAAGCCGATTGTACCACAACCACGGCTGCTCCGGAGGTAACCA
CAGCTGCCGCAGAGGTAACCACAGCGGCCAGTGCCGATGGAGAAACCACC
ACCGCAGCCGCTTCGGCCACCGACACGACCACCGCCTCATCCGGAGGCAG
TGGCAAGAAGCGCGTGAGGAGGACCTTCAGGCGTAAGGTGAGCCGCCCCA
GGAAGATCAAGAAGAGGAGGAGCAACCGAGGCAGGAACAATAGGAGGAGC
CAAAACTCGGGCGCAAGCTTTCTAGACCAT
BO27350.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13135-RC | 399 | CG13135-PC | 1..396 | 17..412 | 1980 | 100 | Plus |
CG13135-RA | 399 | CG13135-PA | 1..396 | 17..412 | 1980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13135-RC | 643 | CG13135-RC | 31..428 | 15..412 | 1990 | 100 | Plus |
CG13135-RA | 576 | CG13135-RA | 31..428 | 15..412 | 1990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10122344..10122741 | 412..15 | 1990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:34:27 has no hits.
BO27350.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:16 Download gff for
BO27350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13135-RA | 33..428 | 17..414 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:13 Download gff for
BO27350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13135-RA | 33..428 | 17..414 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:14 Download gff for
BO27350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13135-RA | 33..428 | 17..414 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:14 Download gff for
BO27350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10122342..10122739 | 17..414 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:13 Download gff for
BO27350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10122342..10122739 | 17..414 | 99 | | Minus |
BO27350.pep Sequence
Translation from 16 to 430
> BO27350.pep
MRKSLLIVGSLLVTIFLAHLPVGLAVSCADDPTDTACIDCTDTANAAEAD
CTTTTAAPEVTTAAAEVTTAASADGETTTAAASATDTTTASSGGSGKKRV
RRTFRRKVSRPRKIKKRRSNRGRNNRRSQNSGASFLDH
BO27350.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13135-PC | 132 | CG13135-PC | 1..132 | 1..132 | 658 | 100 | Plus |
CG13135-PA | 132 | CG13135-PA | 1..132 | 1..132 | 658 | 100 | Plus |
ng2-PA | 112 | CG14266-PA | 14..107 | 38..130 | 167 | 43.8 | Plus |
ng1-PA | 107 | CG10781-PA | 14..105 | 38..128 | 166 | 44.7 | Plus |
CG8087-PA | 142 | CG8087-PA | 23..126 | 25..131 | 158 | 36.6 | Plus |