BO27351.complete Sequence
538 bp assembled on 2010-08-18
GenBank Submission: KX799195
> BO27351.complete
GAAGTTATCAGTCGACATGGATAAACTAACGACAATTAGTGCCACGCTCT
TCATGGCGGCCGATGTCTTTGCGATTGTGAGTCTGGCCCTTCCCGACTGG
ATCATCACGGAGTCCGGAACGGGTGACATCCGATTGGGACTGATGTGGAC
CTGCATGACGCTATATAACCGACCGCAAGTGTGCTATACACCCGAACTGC
AGCCGGAGTGGCTGATTGCACTGATCTGCATCTTTGTGGGCTGCATCTGC
GTGACCACCACCGTCATTCTGCTGGCGTCGTCATCCTGCAACCGGAATGT
GATTCCGTACGCGCGCTGGGTGGGATTCACGGCCATGGTGCTCTTCTGCA
TGGCGGCCGTCGTCTTCCCGCTGGGATTCCACGTAGAGGAGATCGGCGGA
CAGGCCTACCAGCTGCCCAACACATTCAAGATTGGCATCTCCTACATCAT
GTTCGTCCTGGCCCTGTGGATCACCGTCGTGTCTGAGCTCTTTGCCGGCA
AGGTCTGCCTGCCGCACTTCGCAAGCTTTCTAGACCAT
BO27351.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14182-RB | 507 | CG14182-PB | 1..504 | 17..520 | 2520 | 100 | Plus |
| CG14182-RD | 507 | CG14182-PD | 1..504 | 17..520 | 2520 | 100 | Plus |
| CG14182-RA | 507 | CG14182-PA | 1..504 | 17..520 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14182-RB | 626 | CG14182-RB | 51..554 | 17..520 | 2520 | 100 | Plus |
| CG14182-RD | 1032 | CG14182-RD | 51..554 | 17..520 | 2520 | 100 | Plus |
| CG14182-RA | 932 | CG14182-RA | 51..554 | 17..520 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19979191..19979589 | 520..122 | 1995 | 100 | Minus |
| 3L | 28110227 | 3L | 19979655..19979762 | 124..17 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:34:33 has no hits.
BO27351.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:17 Download gff for
BO27351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14182-RA | 1..504 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:15 Download gff for
BO27351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14182-RA | 51..554 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:15 Download gff for
BO27351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14182-RA | 51..554 | 17..522 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:15 Download gff for
BO27351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19979189..19979588 | 123..522 | 99 | <- | Minus |
| 3L | 19979657..19979762 | 17..122 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:15 Download gff for
BO27351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19972289..19972688 | 123..522 | 99 | <- | Minus |
| arm_3L | 19972757..19972862 | 17..122 | 100 | | Minus |
BO27351.pep Sequence
Translation from 16 to 538
> BO27351.pep
MDKLTTISATLFMAADVFAIVSLALPDWIITESGTGDIRLGLMWTCMTLY
NRPQVCYTPELQPEWLIALICIFVGCICVTTTVILLASSSCNRNVIPYAR
WVGFTAMVLFCMAAVVFPLGFHVEEIGGQAYQLPNTFKIGISYIMFVLAL
WITVVSELFAGKVCLPHFASFLDH
BO27351.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14182-PB | 168 | CG14182-PB | 1..168 | 1..168 | 890 | 100 | Plus |
| CG14182-PD | 168 | CG14182-PD | 1..168 | 1..168 | 890 | 100 | Plus |
| CG14182-PA | 168 | CG14182-PA | 1..168 | 1..168 | 890 | 100 | Plus |
| CG14182-PC | 126 | CG14182-PC | 1..126 | 43..168 | 684 | 100 | Plus |
