Clone BO27352 Report

Search the DGRC for BO27352

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:273
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG14406-RA
Protein status:BO27352.pep: Imported from assembly
Sequenced Size:343

Clone Sequence Records

BO27352.complete Sequence

343 bp assembled on 2010-08-18

GenBank Submission: KX796176

> BO27352.complete
GAAGTTATCAGTCGACATGACGCTCCACAAGCTGCCCGCCAAGTGCATTC
TGCTCGTGGTGTTGCTGCTCCTGCTGGACTCCAGCCTGGCCAGGTCGCAA
CAGTTCTTCGTCGCCGAGGATGTGATAACAGGAACGGCAACTGAAACGGG
AACTGCAGCTGCAAGCAGAACCGTATTTGGTGATGATCAATTGCCCATCA
ACGATCCATCGGATCTAAGTGCTGGTTTAAATTTGGCGCCCGTTGGCAGT
CTGATTGCGGCAGCAGCGAATGCCGTACCCCCTGCCCCTGTTCAATTTAT
TCGCACGGCCATGAACAGCGGGCTCGCAAGCTTTCTAGACCAT

BO27352.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14406-RB 312 CG14406-PB 1..309 17..325 1545 100 Plus
CG14406-RA 312 CG14406-PA 1..309 17..325 1545 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14406-RB 375 CG14406-RB 27..335 17..325 1545 100 Plus
CG14406-RA 667 CG14406-RA 27..335 17..325 1545 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14910624..14910819 212..17 980 100 Minus
X 23542271 X 14910205..14910318 325..212 570 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:34:39 has no hits.

BO27352.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:19 Download gff for BO27352.complete
Subject Subject Range Query Range Percent Splice Strand
CG14406-RA 27..335 17..327 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:18 Download gff for BO27352.complete
Subject Subject Range Query Range Percent Splice Strand
CG14406-RA 27..335 17..327 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:17 Download gff for BO27352.complete
Subject Subject Range Query Range Percent Splice Strand
CG14406-RA 27..335 17..327 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:17 Download gff for BO27352.complete
Subject Subject Range Query Range Percent Splice Strand
X 14910201..14910317 213..327 98 <- Minus
X 14910624..14910819 17..212 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:18 Download gff for BO27352.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14804234..14804350 213..327 98 <- Minus
arm_X 14804657..14804852 17..212 100   Minus

BO27352.pep Sequence

Translation from 16 to 343

> BO27352.pep
MTLHKLPAKCILLVVLLLLLDSSLARSQQFFVAEDVITGTATETGTAAAS
RTVFGDDQLPINDPSDLSAGLNLAPVGSLIAAAANAVPPAPVQFIRTAMN
SGLASFLDH

BO27352.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14406-PB 103 CG14406-PB 1..103 1..103 503 100 Plus
CG14406-PA 103 CG14406-PA 1..103 1..103 503 100 Plus