BO27353.complete Sequence
619 bp assembled on 2010-08-18
GenBank Submission: KX798446
> BO27353.complete
GAAGTTATCAGTCGACATGAATGTGGACAAAGCCAGAGACGAGATGATTG
AGATGTCCGAGCAGGTGTGGAAGGATGCGGAGCAGTGGCAAAGAGGTATC
CACAATGGTCAGGCGGTCATGAAGCAGATCAAGGCCATAAATCTTAAGCT
CTTCAGCACCGAGAATAGGCTGAACAACGCGGACTCGCGTAAGGAGCTCC
AGGCCACAGGGAAACGGATCAACCACTTGTACCAATGCCTCCAACGACCT
CTCGCCACGATAGGCAACATTTTAAGGACCCTGACCGGTATCAGGGACAA
CACTGCCAGGATGTTGAGCCGCTTGACCATATTCTTGGACGATGAAACAC
TGGCGAAGCACAGAATACGGCCCAAGCTCGAGAGTTCCAAGCTTCTGAAG
ATGCTGCAGTTCCTAAGCCACCGTTACGATACCGAATGGGAGGTCAAGGA
AATGGTCGTGAACGAATTGGAGAGAATCAGCAACTCCTATGATCTGGATC
TTGCAATGGCGTGCTGGAGCACTTGCAGTCACGCAGGAGGTCCAGAGTTC
GCAAAGATGATGCGCGAGTATTACTGGATCATTGATCGCCGGCAACCTTT
TGCAAGCTTTCTAGACCAT
BO27353.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12984-RA | 588 | CG12984-PA | 1..585 | 17..601 | 2925 | 100 | Plus |
| CG12984-RB | 99 | CG12984-PB | 1..96 | 506..601 | 480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12984-RA | 824 | CG12984-RA | 42..628 | 15..601 | 2935 | 100 | Plus |
| CG12984-RB | 421 | CG12984-RB | 86..225 | 462..601 | 700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20991714..20992160 | 15..461 | 2235 | 100 | Plus |
| 3L | 28110227 | 3L | 20992595..20992734 | 462..601 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:34:45 has no hits.
BO27353.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:20 Download gff for
BO27353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12984-RA | 1..585 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:20 Download gff for
BO27353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12984-RA | 44..628 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:20 Download gff for
BO27353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12984-RA | 44..628 | 17..603 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:20 Download gff for
BO27353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20991716..20992160 | 17..461 | 100 | -> | Plus |
| 3L | 20992595..20992734 | 462..603 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:20 Download gff for
BO27353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20984816..20985260 | 17..461 | 100 | -> | Plus |
| arm_3L | 20985695..20985834 | 462..603 | 98 | | Plus |
BO27353.pep Sequence
Translation from 16 to 619
> BO27353.pep
MNVDKARDEMIEMSEQVWKDAEQWQRGIHNGQAVMKQIKAINLKLFSTEN
RLNNADSRKELQATGKRINHLYQCLQRPLATIGNILRTLTGIRDNTARML
SRLTIFLDDETLAKHRIRPKLESSKLLKMLQFLSHRYDTEWEVKEMVVNE
LERISNSYDLDLAMACWSTCSHAGGPEFAKMMREYYWIIDRRQPFASFLD
H
BO27353.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12984-PA | 195 | CG12984-PA | 1..195 | 1..195 | 1020 | 100 | Plus |
| CG12984-PB | 32 | CG12984-PB | 1..32 | 164..195 | 189 | 100 | Plus |
