BO27356.complete Sequence
757 bp assembled on 2010-08-18
GenBank Submission: KX799220
> BO27356.complete
GAAGTTATCAGTCGACATGCCAACAAATGGCCATAAATACAGCATTTTGA
TGCCCACTTACAATGAAAAGGATAATTTGCCCATTATAATATGGCTAATT
GTGAAATACATGAAGGCGAGCGGCTTGGAATACGAGGTGATTGTGATTGA
TGATGGTAGTCCGGATGGAACACTAGACGTGGCCAAAGACCTGCAGAAGA
TCTACGGGGAGGACAAGATTGTGCTGAGACCACGTGGCTCCAAATTGGGA
CTCGGAACGGCCTACATACATGGCATCAAACATGCCACCGGCGACTTTAT
AGTTATCATCGATGCGGACTTGAGTCATCATCCCAAATTCATTCCCGAGT
TCATTAAGCTGCAACAGGAGGGCAACTATGACATTGTATCCGGCACTCGG
TATGCCGGAAATGGAGGTGTCTTTGGCTGGGACTTCAAGCGCAAGCTCAT
CTCGCGCGGCGCCAACTTTTTGTCCCAGGTGCTTTTACGTCCGAACGCCA
GTGATTTGACCGGCTCCTTCAGGCTCTACAAGAAGGATGTACTGGAGAAA
TGCATTGCCAGCTGCGTGTCCAAAGGCTACGTGTTCCAAATGGAGATGCT
CGTTCGGGCTAGACAGCACGGCTACACCATCGCCGAGGTGCCCATCACCT
TCGTGGACCGTATTTATGGCACCTCCAAGCTCGGCGGGACCGAGATTATT
CAGTTTGCCAAGAACCTTTTGTATCTGTTTGCGACCACAGCAAGCTTTCT
AGACCAT
BO27356.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:35:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10166-RA | 726 | CG10166-PA | 1..723 | 17..739 | 3615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10166-RA | 810 | CG10166-RA | 45..767 | 17..739 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19525477..19525888 | 739..328 | 2045 | 99.8 | Minus |
| 2L | 23513712 | 2L | 19525953..19526165 | 331..119 | 1065 | 100 | Minus |
| 2L | 23513712 | 2L | 19526221..19526324 | 120..17 | 520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:35:01 has no hits.
BO27356.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:24 Download gff for
BO27356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10166-RA | 1..723 | 17..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:25 Download gff for
BO27356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10166-RA | 45..767 | 17..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:26 Download gff for
BO27356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10166-RA | 45..767 | 17..741 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:26 Download gff for
BO27356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19525953..19526163 | 121..331 | 100 | <- | Minus |
| 2L | 19526221..19526324 | 17..120 | 100 | | Minus |
| 2L | 19525475..19525884 | 332..741 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:25 Download gff for
BO27356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19525475..19525884 | 332..741 | 99 | <- | Minus |
| arm_2L | 19525953..19526163 | 121..331 | 100 | <- | Minus |
| arm_2L | 19526221..19526324 | 17..120 | 100 | | Minus |
BO27356.pep Sequence
Translation from 16 to 757
> BO27356.pep
MPTNGHKYSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIVIDDGSPD
GTLDVAKDLQKIYGEDKIVLRPRGSKLGLGTAYIHGIKHATGDFIVIIDA
DLSHHPKFIPEFIKLQQEGNYDIVSGTRYAGNGGVFGWDFKRKLISRGAN
FLSQVLLRPNASDLTGSFRLYKKDVLEKCIASCVSKGYVFQMEMLVRARQ
HGYTIAEVPITFVDRIYGTSKLGGTEIIQFAKNLLYLFATTASFLDH
BO27356.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10166-PA | 241 | CG10166-PA | 1..241 | 1..241 | 1256 | 100 | Plus |
| wol-PA | 326 | CG7870-PA | 69..285 | 9..214 | 165 | 26.4 | Plus |
