Clone BO27361 Report

Search the DGRC for BO27361

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:273
Well:61
Vector:pDNR-Dual
Associated Gene/TranscriptCG13685-RA
Protein status:BO27361.pep: Imported from assembly
Sequenced Size:781

Clone Sequence Records

BO27361.complete Sequence

781 bp assembled on 2010-08-18

GenBank Submission: KX794917

> BO27361.complete
GAAGTTATCAGTCGACATGTCGACGTTACCCTTTTTGCTGAGCGTCGCCG
ACGAGCTGGACAACATACACTCACAGTCCTACATGGATGACTTTGGCTTG
GGCTTCCATCCGCACCGCCAGTACTATCGCACACCCACCATTCAGTTGTC
CCTGCCCGCCAGCACCGACTGGACGGGATCGGGTCGGGACTGGTCCCAGA
CAGCGGGCAACAGGCATACTCGCTACCGCAGCTATAAGTTTTACGATGAC
TCACAGAACAATCTGGAGGAGGAGGAGCCGCCCGTGGAGGATCCTCAACC
CATTGAACAGATGAAGTTGCCACAGCAGTTGGTCCAGCAGACCAACCAGA
CGATATCGGATCCCCAGCAACCGACGAGTGCAACTGCCACTGCAGCCACA
ACTCGCAAGGGACTGGGCATGGTCAACTCCCACTCGCATGATGTGGGTGT
TGGTGGTCTGGGCCTGAATCTCAAAGCTGACGAGGATGAGGACGATGAGA
ACATCGATCGCACGGTGCGCATGTATAATTTGTCCAAGAAGTGCTGCAAG
AACTACTATCGGCACGCCTTGGAGACCGGACCCGGCGCCAGTGGCAAGGT
CAAGTGCAGCAATGCGCGCTCCGAGAGCCATAAGTCCAGCTCCAGTTCGG
AGGAAAGCCTCCAGAAGATACCCTCGCCCATAGAGTTCCTCACCTGCTTT
CTGGTGAAGAAGTCGCGCACCCCCAAGGCAAATGTGCCAGTTGGGCAGCC
GCTGAAGAAGACAGCAAGCTTTCTAGACCAT

BO27361.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13685-RD 1011 CG13685-PD 1..747 17..763 3735 100 Plus
CG13685-RC 750 CG13685-PC 1..747 17..763 3735 100 Plus
CG13685-RB 888 CG13685-PB 1..747 17..763 3735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG13685-RD 2456 CG13685-RD 273..1020 16..763 3740 100 Plus
CG13685-RC 3209 CG13685-RC 273..1020 16..763 3740 100 Plus
CG13685-RB 2456 CG13685-RB 273..1020 16..763 3740 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7747616..7748363 16..763 3740 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:35:13 has no hits.

BO27361.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:26 Download gff for BO27361.complete
Subject Subject Range Query Range Percent Splice Strand
CG13685-RA 1..747 17..765 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:29 Download gff for BO27361.complete
Subject Subject Range Query Range Percent Splice Strand
CG13685-RA 274..1020 17..765 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:28 Download gff for BO27361.complete
Subject Subject Range Query Range Percent Splice Strand
CG13685-RB 274..1020 17..765 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:28 Download gff for BO27361.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7747617..7748363 17..765 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:29 Download gff for BO27361.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7740717..7741463 17..765 99   Plus

BO27361.pep Sequence

Translation from 16 to 781

> BO27361.pep
MSTLPFLLSVADELDNIHSQSYMDDFGLGFHPHRQYYRTPTIQLSLPAST
DWTGSGRDWSQTAGNRHTRYRSYKFYDDSQNNLEEEEPPVEDPQPIEQMK
LPQQLVQQTNQTISDPQQPTSATATAATTRKGLGMVNSHSHDVGVGGLGL
NLKADEDEDDENIDRTVRMYNLSKKCCKNYYRHALETGPGASGKVKCSNA
RSESHKSSSSSEESLQKIPSPIEFLTCFLVKKSRTPKANVPVGQPLKKTA
SFLDH

BO27361.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG13685-PC 249 CG13685-PC 1..249 1..249 1321 100 Plus
CG13685-PA 249 CG13685-PA 1..249 1..249 1321 100 Plus
CG13685-PB 295 CG13685-PB 1..249 1..249 1321 100 Plus
CG13685-PD 336 CG13685-PD 1..249 1..249 1321 100 Plus