Clone BO27364 Report

Search the DGRC for BO27364

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:273
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG15905-RB
Protein status:BO27364.pep: Imported from assembly
Sequenced Size:835

Clone Sequence Records

BO27364.complete Sequence

835 bp assembled on 2010-08-18

GenBank Submission: KX799324

> BO27364.complete
GAAGTTATCAGTCGACATGCTGCTGATATCACTTACGCTGATGGCTTTTG
GCCTGGCCCAAACGCTGCCCATCGAGGAGGCCGAAACGCCGACGACCAGC
GAAATGCCGGATTCAGGGCGAGTGGTTTTCGATCAGCGACAGACTGGCAG
ATTCAACATCCACGTTAGCATCAAGGATGTGGCCATCATCGAGGTGGGCC
AGAATGGACTGGCCGAGGAGACGTATAACGATGAGGAGGATTACTACTAT
GATGACAGTGCGTTGACCGTCAAACCGATCAAGCTAACTACAGGGACCAG
TAGCACCACAACAACGAGCACCACATCGGCCACCCTGCCAGAGAGCACTG
TATCTACAGTGGCTCCTACTACCGAAGCCACGCAGCTGAATACAAGCTTA
AATCTGTTGGCTGACATTGCGGCCAGTGGTATAACGAAGCCCAAGTCCAG
ACTAAACAATCTGATGATTGTAGAGACGCCAATCGGCGGTCTAACGAAGC
CCTTGCACCACCCACTTCATGCTCGATCCAAGGATATACCCAGTATGGCT
GCAGCGGCACCAACTGCTTTAATTACGCCACCCACTTTGCGCGAGAACAT
TGAGTACACGCCGCCCAAAGGTCACAACTCGCCCATTTTCAAGGTGAAAG
TTCAACGATCTTCGGTGCCGGCTACCAAGAAACCCGCTCGCTGCCGAAAT
CATCAGGTGCGAGATGCCCAGGGCAAGTGCACCGACTCGATCTACAGAAA
GCTGTACAGCATGCTGATGGGGATGAATTTTCCTTTTTTGGCAGCCGCAA
ATGCCGCAGAAAGTGCTGCAAGCTTTCTAGACCAT

BO27364.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:35:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG15905-RB 804 CG15905-PB 1..801 17..817 4005 100 Plus
CG15905-RC 729 CG15905-PC 1..728 17..744 3640 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG15905-RB 987 CG15905-RB 78..878 17..817 4005 100 Plus
CG15905-RC 984 CG15905-RC 78..875 17..817 3925 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19646753..19647281 744..216 2645 100 Minus
2R 25286936 2R 19647367..19647568 218..17 1010 100 Minus
2R 25286936 2R 19646592..19646664 817..745 365 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:35:25 has no hits.

BO27364.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:29 Download gff for BO27364.complete
Subject Subject Range Query Range Percent Splice Strand
CG15905-RA 1..729 17..745 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:33 Download gff for BO27364.complete
Subject Subject Range Query Range Percent Splice Strand
CG15905-RB 78..878 17..819 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:31 Download gff for BO27364.complete
Subject Subject Range Query Range Percent Splice Strand
CG15905-RB 78..878 17..819 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:31 Download gff for BO27364.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19647368..19647568 17..217 100   Minus
2R 19646589..19646664 745..819 97 <- Minus
2R 19646753..19647279 218..744 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:33 Download gff for BO27364.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15534873..15535073 17..217 100   Minus
arm_2R 15534094..15534169 745..819 97 <- Minus
arm_2R 15534258..15534784 218..744 100 <- Minus

BO27364.pep Sequence

Translation from 16 to 835

> BO27364.pep
MLLISLTLMAFGLAQTLPIEEAETPTTSEMPDSGRVVFDQRQTGRFNIHV
SIKDVAIIEVGQNGLAEETYNDEEDYYYDDSALTVKPIKLTTGTSSTTTT
STTSATLPESTVSTVAPTTEATQLNTSLNLLADIAASGITKPKSRLNNLM
IVETPIGGLTKPLHHPLHARSKDIPSMAAAAPTALITPPTLRENIEYTPP
KGHNSPIFKVKVQRSSVPATKKPARCRNHQVRDAQGKCTDSIYRKLYSML
MGMNFPFLAAANAAESAASFLDH

BO27364.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15905-PB 267 CG15905-PB 1..267 1..267 1354 100 Plus
CG15905-PC 242 CG15905-PC 1..242 1..242 1229 100 Plus