BO27364.complete Sequence
835 bp assembled on 2010-08-18
GenBank Submission: KX799324
> BO27364.complete
GAAGTTATCAGTCGACATGCTGCTGATATCACTTACGCTGATGGCTTTTG
GCCTGGCCCAAACGCTGCCCATCGAGGAGGCCGAAACGCCGACGACCAGC
GAAATGCCGGATTCAGGGCGAGTGGTTTTCGATCAGCGACAGACTGGCAG
ATTCAACATCCACGTTAGCATCAAGGATGTGGCCATCATCGAGGTGGGCC
AGAATGGACTGGCCGAGGAGACGTATAACGATGAGGAGGATTACTACTAT
GATGACAGTGCGTTGACCGTCAAACCGATCAAGCTAACTACAGGGACCAG
TAGCACCACAACAACGAGCACCACATCGGCCACCCTGCCAGAGAGCACTG
TATCTACAGTGGCTCCTACTACCGAAGCCACGCAGCTGAATACAAGCTTA
AATCTGTTGGCTGACATTGCGGCCAGTGGTATAACGAAGCCCAAGTCCAG
ACTAAACAATCTGATGATTGTAGAGACGCCAATCGGCGGTCTAACGAAGC
CCTTGCACCACCCACTTCATGCTCGATCCAAGGATATACCCAGTATGGCT
GCAGCGGCACCAACTGCTTTAATTACGCCACCCACTTTGCGCGAGAACAT
TGAGTACACGCCGCCCAAAGGTCACAACTCGCCCATTTTCAAGGTGAAAG
TTCAACGATCTTCGGTGCCGGCTACCAAGAAACCCGCTCGCTGCCGAAAT
CATCAGGTGCGAGATGCCCAGGGCAAGTGCACCGACTCGATCTACAGAAA
GCTGTACAGCATGCTGATGGGGATGAATTTTCCTTTTTTGGCAGCCGCAA
ATGCCGCAGAAAGTGCTGCAAGCTTTCTAGACCAT
BO27364.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:35:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15905-RB | 804 | CG15905-PB | 1..801 | 17..817 | 4005 | 100 | Plus |
CG15905-RC | 729 | CG15905-PC | 1..728 | 17..744 | 3640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15905-RB | 987 | CG15905-RB | 78..878 | 17..817 | 4005 | 100 | Plus |
CG15905-RC | 984 | CG15905-RC | 78..875 | 17..817 | 3925 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19646753..19647281 | 744..216 | 2645 | 100 | Minus |
2R | 25286936 | 2R | 19647367..19647568 | 218..17 | 1010 | 100 | Minus |
2R | 25286936 | 2R | 19646592..19646664 | 817..745 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:35:25 has no hits.
BO27364.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:29 Download gff for
BO27364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15905-RA | 1..729 | 17..745 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:33 Download gff for
BO27364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15905-RB | 78..878 | 17..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:31 Download gff for
BO27364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15905-RB | 78..878 | 17..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:31 Download gff for
BO27364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19647368..19647568 | 17..217 | 100 | | Minus |
2R | 19646589..19646664 | 745..819 | 97 | <- | Minus |
2R | 19646753..19647279 | 218..744 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:33 Download gff for
BO27364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15534873..15535073 | 17..217 | 100 | | Minus |
arm_2R | 15534094..15534169 | 745..819 | 97 | <- | Minus |
arm_2R | 15534258..15534784 | 218..744 | 100 | <- | Minus |
BO27364.pep Sequence
Translation from 16 to 835
> BO27364.pep
MLLISLTLMAFGLAQTLPIEEAETPTTSEMPDSGRVVFDQRQTGRFNIHV
SIKDVAIIEVGQNGLAEETYNDEEDYYYDDSALTVKPIKLTTGTSSTTTT
STTSATLPESTVSTVAPTTEATQLNTSLNLLADIAASGITKPKSRLNNLM
IVETPIGGLTKPLHHPLHARSKDIPSMAAAAPTALITPPTLRENIEYTPP
KGHNSPIFKVKVQRSSVPATKKPARCRNHQVRDAQGKCTDSIYRKLYSML
MGMNFPFLAAANAAESAASFLDH
BO27364.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15905-PB | 267 | CG15905-PB | 1..267 | 1..267 | 1354 | 100 | Plus |
CG15905-PC | 242 | CG15905-PC | 1..242 | 1..242 | 1229 | 100 | Plus |