Clone BO27368 Report

Search the DGRC for BO27368

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:273
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG34137-RA
Protein status:BO27368.pep: Imported from assembly
Sequenced Size:772

Clone Sequence Records

BO27368.complete Sequence

772 bp assembled on 2010-08-18

GenBank Submission: KX797117

> BO27368.complete
GAAGTTATCAGTCGACATGTCAGCATTCACCTGCACACAGTACCTAAACC
TCAATTCGAAGGACGTTTCGTCAATGTCCACCACCGTTACATTAAACGCA
GCCTGCTTTGGGCGGCAGGACTTGAACCTATTTATTGAGAGTCTAGAAAC
CATATCTCGCCTGGAAAGGGAGAGACACGAGCGACGCCAGCTTCGGCGCG
AGCAAAGACTACACCAGGCGCGAATTACTGAGTTGGCGGACGAACGATGC
TCCAGTCCGACACCCACAGCCGAGGAAGCCGTAGACGAGCCGCTCTTATA
TCTGGAGGCCAAGTGCATACCGTATGCGGTTTCTGGCCATATTTTTGCAC
AGGGCGACAACACACCTTGTCCCGAATACCATATGTGTGACGACGAAGCG
TACGGAAGTGCTTCTTATTCAGCACGCAGCAGCGTCACCTACTGTAGCTG
TGGCGGAATCTCCAATCTGGATTCAGACAGCGGAGAATCCGAAGGGAAGA
TGAAACCGTTTGTGCATCCGAGCTCCCAGGCCAAACCAAAGAATAGGTAT
TCTTCAACGCGATCCCGCATAATTAACTTGATGTTAAAGAGAAATAGGGC
TAAGCCCGCTCTCATCGAGCATCTGCAGCGACAGGGACACGGTGACACGT
TATCCAGCGAGAACATCAGTCACCAGTTCCCACGGCTTACTTCTAGCCAA
AAAAGGTCGGCTGAGCATAGTTTTCTGGATAAGGCCCTTCGATATCTTAC
ATTAGCAAGCTTTCTAGACCAT

BO27368.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:35:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-RB 741 CG34137-PB 1..738 17..754 3675 99.9 Plus
CG34137-RA 741 CG34137-PA 1..738 17..754 3675 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-RB 887 CG34137-RB 73..810 17..754 3675 99.9 Plus
CG34137-RA 892 CG34137-RA 78..815 17..754 3675 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22151826..22152563 17..754 3675 99.9 Plus
Blast to na_te.dros performed on 2014-11-28 02:35:48 has no hits.

BO27368.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:33 Download gff for BO27368.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 78..815 17..756 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:42 Download gff for BO27368.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 78..815 17..756 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:38 Download gff for BO27368.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 78..815 17..756 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:38 Download gff for BO27368.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22151826..22152563 17..756 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:42 Download gff for BO27368.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22151826..22152563 17..756 99   Plus

BO27368.pep Sequence

Translation from 16 to 772

> BO27368.pep
MSAFTCTQYLNLNSKDVSSMSTTVTLNAACFGRQDLNLFIESLETISRLE
RERHERRQLRREQRLHQARITELADERCSSPTPTAEEAVDEPLLYLEAKC
IPYAVSGHIFAQGDNTPCPEYHMCDDEAYGSASYSARSSVTYCSCGGISN
LDSDSGESEGKMKPFVHPSSQAKPKNRYSSTRSRIINLMLKRNRAKPALI
EHLQRQGHGDTLSSENISHQFPRLTSSQKRSAEHSFLDKALRYLTLASFL
DH

BO27368.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-PB 246 CG34137-PB 1..246 1..246 1277 100 Plus
CG34137-PA 246 CG34137-PA 1..246 1..246 1277 100 Plus