BO27370.complete Sequence
286 bp assembled on 2010-08-18
GenBank Submission: KX797025
> BO27370.complete
GAAGTTATCAGTCGACATGTTAAATTTAAAACACTTTGCCAGCCACGCCT
ACCGCCAGTACGAACTGGTGACGTGCGTGAACATGCTGGAGCCCTGGGAA
AAGAAGCTGATCAATGGATTCTTTCTGGTGATGCTGCTCCTGGTGCTCTT
CTCCAGCTTCATGTATCTTCCCAACTACATGCAAACCCTAATGCAATTTG
TAACGCCGCCCAACTGGCACAATTCCCCGGATAGCGCAGCCTATGTGGCA
CAAAAGATCGCACGGAGCGCAAGCTTTCTAGACCAT
BO27370.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34293-RB | 255 | CG34293-PB | 1..252 | 17..268 | 1260 | 100 | Plus |
| CG34293-RA | 255 | CG34293-PA | 1..252 | 17..268 | 1260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34293-RB | 740 | CG34293-RB | 48..299 | 17..268 | 1260 | 100 | Plus |
| CG34293-RA | 446 | CG34293-RA | 48..299 | 17..268 | 1260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27165216..27165370 | 268..114 | 775 | 100 | Minus |
| 3R | 32079331 | 3R | 27165432..27165528 | 113..17 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:36:00 has no hits.
BO27370.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:36 Download gff for
BO27370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34293-RA | 53..299 | 22..270 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:46 Download gff for
BO27370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34293-RA | 53..299 | 22..270 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:42 Download gff for
BO27370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34293-RA | 53..299 | 22..270 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:42 Download gff for
BO27370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27165213..27165370 | 114..270 | 98 | <- | Minus |
| 3R | 27165432..27165523 | 22..113 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:46 Download gff for
BO27370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22991154..22991245 | 22..113 | 100 | | Minus |
| arm_3R | 22990935..22991092 | 114..270 | 98 | <- | Minus |
BO27370.pep Sequence
Translation from 16 to 286
> BO27370.pep
MLNLKHFASHAYRQYELVTCVNMLEPWEKKLINGFFLVMLLLVLFSSFMY
LPNYMQTLMQFVTPPNWHNSPDSAAYVAQKIARSASFLDH
BO27370.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:08:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34293-PB | 84 | CG34293-PB | 1..84 | 1..84 | 447 | 100 | Plus |
| CG34293-PA | 84 | CG34293-PA | 1..84 | 1..84 | 447 | 100 | Plus |
