BO27372.complete Sequence
454 bp assembled on 2010-08-18
GenBank Submission: KX798732
> BO27372.complete
GAAGTTATCAGTCGACATGAAGGCTTTCATCGTTCTGGTTGCCCTGGCCT
GTGCCGCCCCAGCTTTCGGTCGCACCATGGACCGTTGCTCCCTGGCCCGC
GAGATGTCCAACCTGGGCGTTCCTCGTGACCAATTGGCTCGTTGGGCCTG
TATTGCCGAGCACGAGTCCTCCTACCGCACCGGAGTGGTTGGTCCCGAGA
ACTACAACGGCTCCAACGACTACGGAATCTTCCAGATCAACGACTACTAC
TGGTGCGCTCCTCCCAGCGGTCGCTTCTCCTACAACGAATGCGGATTGAG
CTGCAACGCTCTCCTGACCGACGACATCACCCACTCCGTCCGTTGTGCCC
AGAAGGTCCTCAGCCAGCAGGGATGGTCCGCCTGGTCCACCTGGCACTAC
TGCAGCGGATGGTTGCCGTCCATCGATGACTGCTTCGCAAGCTTTCTAGA
CCAT
BO27372.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LysD-RA | 423 | CG9118-PA | 1..420 | 17..436 | 2100 | 100 | Plus |
LysB-RB | 423 | CG1179-PB | 1..420 | 17..436 | 1860 | 96.2 | Plus |
LysB-RA | 423 | CG1179-PA | 1..420 | 17..436 | 1860 | 96.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LysD-RA | 480 | CG9118-RA | 19..439 | 16..436 | 2105 | 100 | Plus |
LysB-RB | 611 | CG1179-RB | 22..443 | 15..436 | 1870 | 96.2 | Plus |
LysB-RA | 486 | CG1179-RA | 22..443 | 15..436 | 1870 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1210758..1211178 | 436..16 | 2105 | 100 | Minus |
3L | 28110227 | 3L | 1207392..1207813 | 15..436 | 1870 | 96.2 | Plus |
3L | 28110227 | 3L | 1212952..1213371 | 17..436 | 1800 | 95.2 | Plus |
3L | 28110227 | 3L | 1210484..1210726 | 16..258 | 1020 | 94.7 | Plus |
3L | 28110227 | 3L | 1227770..1228191 | 15..436 | 900 | 81.9 | Plus |
3L | 28110227 | 3L | 1218286..1218607 | 410..89 | 635 | 79.8 | Minus |
3L | 28110227 | 3L | 1194874..1195241 | 435..68 | 625 | 78 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:36:05 has no hits.
BO27372.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:38 Download gff for
BO27372.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LysD-RA | 20..439 | 17..438 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:47 Download gff for
BO27372.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LysD-RA | 20..439 | 17..438 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:44 Download gff for
BO27372.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LysD-RA | 20..439 | 17..438 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:44 Download gff for
BO27372.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1210756..1211177 | 17..438 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:47 Download gff for
BO27372.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1210756..1211177 | 17..438 | 99 | | Minus |
BO27372.pep Sequence
Translation from 16 to 454
> BO27372.pep
MKAFIVLVALACAAPAFGRTMDRCSLAREMSNLGVPRDQLARWACIAEHE
SSYRTGVVGPENYNGSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALL
TDDITHSVRCAQKVLSQQGWSAWSTWHYCSGWLPSIDDCFASFLDH
BO27372.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:08:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LysD-PA | 140 | CG9118-PA | 1..140 | 1..140 | 786 | 100 | Plus |
LysC-PA | 140 | CG9111-PA | 1..140 | 1..140 | 777 | 98.6 | Plus |
LysB-PB | 140 | CG1179-PB | 1..140 | 1..140 | 770 | 98.6 | Plus |
LysB-PA | 140 | CG1179-PA | 1..140 | 1..140 | 770 | 98.6 | Plus |
LysE-PA | 140 | CG1180-PA | 1..140 | 1..140 | 755 | 96.4 | Plus |