BO27374.complete Sequence
556 bp assembled on 2010-08-18
> BO27374.complete
GAAGTTATCAGTCGACATGGGTACCTCTGTATTGGCCACGATGTGTGCTG
AGCGCCTGACCAAGCTCCTCGTCCGCTACTCCCGTGCTCAGCCTCCCGTG
GGGCGGAATCAGTCCCACTGCGTCGATAATGTGCTAAGTCCTTTGCCAAG
GAGCGAAGCAACTACCGCCTTCCTGAAGCCAATGAACAATGCTGGCCAGG
ACCATCCCCCATCGAAGTCGGCCAACAAGTGGCAGCCGATGGGTACCATC
ACGAGCATCGGACAGAGATTCCAGCGTGAGGCCATGGATGAGATTTGTGC
CAGGGCCAAGGACCGCCTGCTGCCAAAGACCGAACCTCGACGCTTGAACT
TCTCTAGAAATCACGCTTTCTTCCCCAACAAATCGAGAGGCCTTGAAGAT
TGGAAGAAACCGGAGGGTGGGCGGTACTCAGCTCCATTTGTCAGCCTATT
CCAGGCTCCGAACTGTCCTAGTCTGCCTAAGAAGTCGTTTTCTCATCCGC
TTGCCTTCGATCGTCAAAAACTGTATCGAGACTGCTATGCAAGCTTTCTA
GACCAT
BO27374.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
whip-RA | 501 | CG34218-PA | 1..498 | 41..538 | 2490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
whip-RA | 860 | CG34218-RA | 182..703 | 17..538 | 2610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8362516..8363037 | 538..17 | 2610 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:36:16 has no hits.
BO27374.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:40 Download gff for
BO27374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34218-RA | 182..703 | 17..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:51 Download gff for
BO27374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
whip-RA | 182..703 | 17..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:47 Download gff for
BO27374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
whip-RA | 182..703 | 17..540 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:47 Download gff for
BO27374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8362514..8363037 | 17..540 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:51 Download gff for
BO27374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4250019..4250542 | 17..540 | 99 | | Minus |
BO27374.pep Sequence
Translation from 16 to 556
> BO27374.pep
MGTSVLATMCAERLTKLLVRYSRAQPPVGRNQSHCVDNVLSPLPRSEATT
AFLKPMNNAGQDHPPSKSANKWQPMGTITSIGQRFQREAMDEICARAKDR
LLPKTEPRRLNFSRNHAFFPNKSRGLEDWKKPEGGRYSAPFVSLFQAPNC
PSLPKKSFSHPLAFDRQKLYRDCYASFLDH
BO27374.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:09:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
whip-PA | 166 | CG34218-PA | 1..166 | 9..174 | 899 | 100 | Plus |