Clone BO27374 Report

Search the DGRC for BO27374

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:273
Well:74
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO27374.pep: Imported from assembly
Sequenced Size:556

Clone Sequence Records

BO27374.complete Sequence

556 bp assembled on 2010-08-18

> BO27374.complete
GAAGTTATCAGTCGACATGGGTACCTCTGTATTGGCCACGATGTGTGCTG
AGCGCCTGACCAAGCTCCTCGTCCGCTACTCCCGTGCTCAGCCTCCCGTG
GGGCGGAATCAGTCCCACTGCGTCGATAATGTGCTAAGTCCTTTGCCAAG
GAGCGAAGCAACTACCGCCTTCCTGAAGCCAATGAACAATGCTGGCCAGG
ACCATCCCCCATCGAAGTCGGCCAACAAGTGGCAGCCGATGGGTACCATC
ACGAGCATCGGACAGAGATTCCAGCGTGAGGCCATGGATGAGATTTGTGC
CAGGGCCAAGGACCGCCTGCTGCCAAAGACCGAACCTCGACGCTTGAACT
TCTCTAGAAATCACGCTTTCTTCCCCAACAAATCGAGAGGCCTTGAAGAT
TGGAAGAAACCGGAGGGTGGGCGGTACTCAGCTCCATTTGTCAGCCTATT
CCAGGCTCCGAACTGTCCTAGTCTGCCTAAGAAGTCGTTTTCTCATCCGC
TTGCCTTCGATCGTCAAAAACTGTATCGAGACTGCTATGCAAGCTTTCTA
GACCAT

BO27374.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:18
Subject Length Description Subject Range Query Range Score Percent Strand
whip-RA 501 CG34218-PA 1..498 41..538 2490 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:19
Subject Length Description Subject Range Query Range Score Percent Strand
whip-RA 860 CG34218-RA 182..703 17..538 2610 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8362516..8363037 538..17 2610 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:36:16 has no hits.

BO27374.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:40 Download gff for BO27374.complete
Subject Subject Range Query Range Percent Splice Strand
CG34218-RA 182..703 17..540 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:51 Download gff for BO27374.complete
Subject Subject Range Query Range Percent Splice Strand
whip-RA 182..703 17..540 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:47 Download gff for BO27374.complete
Subject Subject Range Query Range Percent Splice Strand
whip-RA 182..703 17..540 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:47 Download gff for BO27374.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8362514..8363037 17..540 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:51 Download gff for BO27374.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4250019..4250542 17..540 99   Minus

BO27374.pep Sequence

Translation from 16 to 556

> BO27374.pep
MGTSVLATMCAERLTKLLVRYSRAQPPVGRNQSHCVDNVLSPLPRSEATT
AFLKPMNNAGQDHPPSKSANKWQPMGTITSIGQRFQREAMDEICARAKDR
LLPKTEPRRLNFSRNHAFFPNKSRGLEDWKKPEGGRYSAPFVSLFQAPNC
PSLPKKSFSHPLAFDRQKLYRDCYASFLDH

BO27374.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
whip-PA 166 CG34218-PA 1..166 9..174 899 100 Plus