BO27379.complete Sequence
514 bp assembled on 2010-08-18
GenBank Submission: KX796119
> BO27379.complete
GAAGTTATCAGTCGACATGGCCTGTCGCTGCAAATATCTGAAGCAGATCT
TTACCAAGTGCTGCTACTGCTATTCCCTGCGTTTCGGTGTGCTGCTCTTC
GGATGCATTTTTCTAACCTGGTTCATTTACATCACCATCGGCACCGGCTT
CATGATGGAGTGCATCTTTCCGAACGAGTATCAGAGGTCCCTTATCCCAG
CACCGGCGGCCCTCAAGGCCACCATGGTCTTCTCCTTCTTCGGCATCATA
GTTTCGGCCATGCTCTGCCTGGGAGTGCACAATAACAACGAGATGCTCTT
CCTGCCATTTTTGGTTTTCACACCCATTTGGATAATTGTGCACATTTTTG
CCCTGACCGTTTACAGCTTTAATACCATCATCATCATCCTGACTGTCATC
ACAATGTTACTTTTAGTGTATGCCTGGCTGGTGGTTTGGTCCTACTACAT
AGAACTGCTCTTCGCCTACGAAGATGAACTGGAAACCGGTTATGTGGCAA
GCTTTCTAGACCAT
BO27379.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:54:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42288-RA | 483 | CG42288-PA | 1..480 | 17..496 | 2400 | 100 | Plus |
| CG42288-RB | 474 | CG42288-PB | 1..471 | 17..496 | 2230 | 98.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:55:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42288-RA | 648 | CG42288-RA | 78..558 | 16..496 | 2405 | 100 | Plus |
| CG42288-RB | 639 | CG42288-RB | 78..549 | 16..496 | 2235 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:54:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14091108..14091375 | 16..283 | 1340 | 100 | Plus |
| 2R | 25286936 | 2R | 14091448..14091571 | 284..407 | 620 | 100 | Plus |
| 2R | 25286936 | 2R | 14091636..14091724 | 408..496 | 445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:54:58 has no hits.
BO27379.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:52:37 Download gff for
BO27379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42288-RA | 79..558 | 17..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:34 Download gff for
BO27379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42288-RA | 79..558 | 17..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:22 Download gff for
BO27379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42288-RA | 79..558 | 17..498 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:22 Download gff for
BO27379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14091109..14091375 | 17..283 | 100 | -> | Plus |
| 2R | 14091448..14091571 | 284..407 | 100 | -> | Plus |
| 2R | 14091636..14091724 | 408..498 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:34 Download gff for
BO27379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9978614..9978880 | 17..283 | 100 | -> | Plus |
| arm_2R | 9978953..9979076 | 284..407 | 100 | -> | Plus |
| arm_2R | 9979141..9979229 | 408..498 | 97 | | Plus |
BO27379.pep Sequence
Translation from 16 to 514
> BO27379.pep
MACRCKYLKQIFTKCCYCYSLRFGVLLFGCIFLTWFIYITIGTGFMMECI
FPNEYQRSLIPAPAALKATMVFSFFGIIVSAMLCLGVHNNNEMLFLPFLV
FTPIWIIVHIFALTVYSFNTIIIILTVITMLLLVYAWLVVWSYYIELLFA
YEDELETGYVASFLDH
BO27379.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:20:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42288-PA | 160 | CG42288-PA | 1..160 | 1..160 | 856 | 100 | Plus |
| CG42288-PB | 157 | CG42288-PB | 1..157 | 1..160 | 830 | 98.1 | Plus |
