BO27382.complete Sequence
478 bp assembled on 2010-09-22
GenBank Submission: KX796916
> BO27382.complete
GAAGTTATCAGTCGACATGGCAGTCGGCTTCATTGTAATCTTCAGCGCCA
TATTCGTCCTGGCCCAAGGATCAAATCTTTTGCCCATTGAGCAGCAATCG
GAGGTGCCAATCCATTCTGGTGCTCCAGCGGCAGTCATTTCGCAAGGACA
ACAGTCTGTGTCCCAGTCCGTTGGTTCTGCTTACGGTCAAGACCAAGGGT
TGGCTGGTGCACGACCCTATTGGGCTGCACCTCGTCCTGCTCTGGCTGCA
CCTCGTCCTGCTGAGTCCTACGCTCGTCCTGCTGTGGCTGTACCTCGTCC
TTCTGTGGCTGCACCTCGTCCGGCTGTGTCCTACGCTCGTCCTGCAGCCG
TGGTGGTTCCTGCTTTGGTGGTTGCTCCTATTCGCCAGCCTCAGGGAGTC
CCTGTCCCAGCCGTTGTAGGAGCTAGTCAAGGAAATGTGTACCATGGTCG
CCATCATGGCGCAAGCTTTCTAGACCAT
BO27382.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:56:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33333-RA | 447 | CG33333-PA | 1..444 | 17..460 | 2220 | 100 | Plus |
| CG33333-RA | 447 | CG33333-PA | 270..329 | 223..282 | 225 | 91.7 | Plus |
| CG33333-RA | 447 | CG33333-PA | 207..266 | 286..345 | 225 | 91.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:56:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33333-RA | 576 | CG33333-RA | 18..461 | 17..460 | 2220 | 100 | Plus |
| CG33333-RA | 576 | CG33333-RA | 224..283 | 286..345 | 225 | 91.7 | Plus |
| CG33333-RA | 576 | CG33333-RA | 287..346 | 223..282 | 225 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:56:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17417484..17417927 | 17..460 | 2220 | 100 | Plus |
| 3R | 32079331 | 3R | 17417690..17417749 | 286..345 | 225 | 91.7 | Plus |
| 3R | 32079331 | 3R | 17417753..17417812 | 223..282 | 225 | 91.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:56:26 has no hits.
BO27382.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 18:49:46 Download gff for
BO27382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33333-RA | 1..444 | 17..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:12 Download gff for
BO27382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33333-RA | 18..461 | 17..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:07:27 Download gff for
BO27382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33333-RA | 18..461 | 17..462 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:07:27 Download gff for
BO27382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17417484..17417927 | 17..462 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:12 Download gff for
BO27382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13243206..13243649 | 17..462 | 99 | | Plus |
BO27382.pep Sequence
Translation from 16 to 478
> BO27382.pep
MAVGFIVIFSAIFVLAQGSNLLPIEQQSEVPIHSGAPAAVISQGQQSVSQ
SVGSAYGQDQGLAGARPYWAAPRPALAAPRPAESYARPAVAVPRPSVAAP
RPAVSYARPAAVVVPALVVAPIRQPQGVPVPAVVGASQGNVYHGRHHGAS
FLDH
BO27382.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:33:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33333-PA | 148 | CG33333-PA | 1..148 | 1..148 | 750 | 100 | Plus |
| CG42834-PA | 122 | CG42834-PA | 1..103 | 1..88 | 139 | 36.1 | Plus |
