BO27390.complete Sequence
268 bp assembled on 2010-08-18
GenBank Submission: KX797278
> BO27390.complete
GAAGTTATCAGTCGACATGCGTTTATATAAAATATTCTGCCTAATTTGTT
CCATATTTGGCTGTGTTTCAGCTTTAAAAGATCCGAGCTGTGCTGTTGAG
TTGTTTGGCCAAGGTGCTTGCAACACTTTGATTACTCGAATCGGCTATTT
ACGTTGGGAAAACATGTGTACATCAAAGAACTTTGTTGCATGCGACACCG
ATGGAACTTCATTTGAGAGCATTAAGGAATGCGAAGATAAATGCAAAGAG
GCAAGCTTTCTAGACCAT
BO27390.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:55:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp23F-RA | 237 | CG42459-PA | 1..234 | 17..250 | 1155 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:55:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp23F-RA | 322 | CG42459-RA | 36..269 | 17..250 | 1155 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:55:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3387407..3387573 | 250..84 | 835 | 100 | Minus |
2L | 23513712 | 2L | 3387642..3387708 | 83..17 | 320 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:55:28 has no hits.
BO27390.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:52:43 Download gff for
BO27390.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 36..269 | 17..252 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:45 Download gff for
BO27390.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 36..269 | 17..252 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:31 Download gff for
BO27390.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 36..269 | 17..252 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:31 Download gff for
BO27390.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3387405..3387573 | 84..252 | 98 | <- | Minus |
2L | 3387642..3387708 | 17..83 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:45 Download gff for
BO27390.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3387405..3387573 | 84..252 | 98 | <- | Minus |
arm_2L | 3387642..3387708 | 17..83 | 98 | | Minus |
BO27390.pep Sequence
Translation from 16 to 268
> BO27390.pep
MRLYKIFCLICSIFGCVSALKDPSCAVELFGQGACNTLITRIGYLRWENM
CTSKNFVACDTDGTSFESIKECEDKCKEASFLDH
BO27390.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:21:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp23F-PA | 78 | CG42459-PA | 1..78 | 1..78 | 430 | 100 | Plus |
CG42460-PB | 79 | CG42460-PB | 1..78 | 1..78 | 212 | 52.6 | Plus |
CG42460-PA | 79 | CG42460-PA | 1..78 | 1..78 | 212 | 52.6 | Plus |