BO27394.complete Sequence
754 bp assembled on 2010-08-18
> BO27394.complete
GAAGTTATCAGTCGACATGCTATCGCTGCTAGACCAGCCGTCCGCATCGC
GAGGGTGGGATTCAACCATGTCAAAGCCAGCTCTGTATTATGCCACCCTA
AGTCCCCCATCGCGCGCCGTCCTCCTCACGGCTAAGGCGATCGGACTCGA
CCTTGAACTACGGCCAATTAACCTGCTGAAGGGAGAGCATCTGACTCCGG
AATTCCTCAAGCTGAACCCCCAGCACACCATCCCGACCCTGATCGACGGC
GAGGCCACTATCATTGACTCGCACGCCATCTGCGCCTACCTGGTGGAGAA
GTATGGCCAGAAGGAGCAGCAGCTCTATCCGAAGGAATTGGTGCAGCGCG
CCAACGTGGATGCTCGGCTCCATCTGGACTCCGGCCACCTCTTCGCGCGC
CTGCGCTTCCTTTACGAGCCCATCCTGTATTATGGATCGACGGACTGCTC
CATCGACAAGATCGCATACATCCAGAAGTGCTGGGAGATCCTAGAGGGAT
TCCTCAAGGATCAGCCGTATTTGTGTGGTTCTGATCTAACCATCGCAGAC
TTTTGCGCCGTGGCCACCGTAACCTCGGTGAACGACACCGCTCCCATCGA
TGAATTTAAGTTTCCCAAGATGCACGCCTGGCTGAAGCGTCTGGCAGAGC
TACCCTACTACCAGGAGGTAAACGGCGACGGCGCTGACGAGCTTAAGAGC
ATCTTCAAGGCCAAGCTGGCAGAAAACCGTGGCAAGGCAAGCTTTCTAGA
CCAT
BO27394.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:55:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 672 | CG16936-PC | 1..669 | 68..736 | 3345 | 100 | Plus |
GstE12-RB | 672 | CG16936-PB | 1..669 | 68..736 | 3345 | 100 | Plus |
GstE12-RD | 672 | CG16936-PD | 1..669 | 68..736 | 3345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:55:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 1311 | CG16936-RC | 492..1211 | 17..736 | 3600 | 100 | Plus |
GstE12-RD | 907 | CG16936-RD | 130..807 | 59..736 | 3390 | 100 | Plus |
GstE12-RB | 1022 | CG16936-RB | 220..896 | 60..736 | 3385 | 100 | Plus |
GstE12-RD | 907 | CG16936-RD | 27..69 | 17..59 | 215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:55:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24766844..24767418 | 736..162 | 2875 | 100 | Minus |
2R | 25286936 | 2R | 24767474..24767578 | 163..59 | 525 | 100 | Minus |
2R | 25286936 | 2R | 24767639..24767681 | 59..17 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:55:45 has no hits.
BO27394.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:52:46 Download gff for
BO27394.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-RA | 56..732 | 60..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:50 Download gff for
BO27394.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RC | 494..1213 | 17..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:36 Download gff for
BO27394.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RC | 492..1211 | 17..738 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:36 Download gff for
BO27394.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24766842..24767417 | 163..738 | 99 | <- | Minus |
2R | 24767475..24767577 | 60..162 | 100 | <- | Minus |
2R | 24767639..24767681 | 17..59 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:50 Download gff for
BO27394.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20654365..20654940 | 163..738 | 99 | <- | Minus |
arm_2R | 20654998..20655100 | 60..162 | 100 | <- | Minus |
arm_2R | 20655162..20655204 | 17..59 | 100 | | Minus |
BO27394.pep Sequence
Translation from 16 to 754
> BO27394.pep
MLSLLDQPSASRGWDSTMSKPALYYATLSPPSRAVLLTAKAIGLDLELRP
INLLKGEHLTPEFLKLNPQHTIPTLIDGEATIIDSHAICAYLVEKYGQKE
QQLYPKELVQRANVDARLHLDSGHLFARLRFLYEPILYYGSTDCSIDKIA
YIQKCWEILEGFLKDQPYLCGSDLTIADFCAVATVTSVNDTAPIDEFKFP
KMHAWLKRLAELPYYQEVNGDGADELKSIFKAKLAENRGKASFLDH
BO27394.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-PC | 223 | CG16936-PC | 1..223 | 18..240 | 1169 | 100 | Plus |
GstE12-PB | 223 | CG16936-PB | 1..223 | 18..240 | 1169 | 100 | Plus |
GstE12-PD | 223 | CG16936-PD | 1..223 | 18..240 | 1169 | 100 | Plus |
GstE12-PA | 223 | CG16936-PA | 1..223 | 18..240 | 1169 | 100 | Plus |
GstE11-PB | 225 | CG5224-PB | 3..225 | 19..240 | 566 | 49.3 | Plus |