BO27401.complete Sequence
526 bp assembled on 2010-08-18
GenBank Submission: KX796107
> BO27401.complete
GAAGTTATCAGTCGACATGGATTTCGAATTCCTTACTCCGCCGCCAGAGG
AACGGACCATTCGCACCCACAATCTGACCGAAGAACAGGTCAAGGATTTG
GAGATTGCCTTTTCCCTGTTTGACGACCAAGACACTAAGGTTATTCCTAT
AACAAATCTCAGGCAACTAATGCTGTCTGTGGCCCACTATCCCAGTGATA
TGGAATTGCAGGAAATTCAGGCCGAGATCGATGCTGATGGATCCGGTGAG
TTATATCTCAGCGATTTCCTTCACATCATGTCTCAGAGGTACGCAAACAT
GTCTACCGAGGATGAAATTATAGCTGCATTCAGAGTCTTTGACAAAGAAG
GAACCGGCTTAATATCTGAATCGGAATTTCGTCACATAATGCAGAACATG
GGGGAGCAATTGACGGATGATGAGGTGGAGGAGATCATCCGTGATGCAAA
TTCTGATTTGGAAGGCAATATAGACTATGTGCGATTTGTCAGAATGATGT
CCACTACAGCAAGCTTTCTAGACCAT
BO27401.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:40:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17770-RA | 495 | CG17770-PA | 1..492 | 17..508 | 2460 | 100 | Plus |
CG5024-RB | 498 | CG5024-PB | 209..351 | 222..364 | 190 | 75.5 | Plus |
CG5024-RA | 498 | CG5024-PA | 209..351 | 222..364 | 190 | 75.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acam-RB | 1224 | CG17769-RB | 78..570 | 16..508 | 2465 | 100 | Plus |
CG17770-RA | 1224 | CG17770-RA | 78..570 | 16..508 | 2465 | 100 | Plus |
CG5024-RB | 643 | CG5024-RB | 318..460 | 222..364 | 190 | 75.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25811988..25812480 | 16..508 | 2465 | 100 | Plus |
3R | 32079331 | 3R | 25811413..25811555 | 222..364 | 190 | 75.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:40:37 has no hits.
BO27401.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:39 Download gff for
BO27401.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17770-RA | 1..492 | 17..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:27 Download gff for
BO27401.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17770-RA | 79..570 | 17..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:13 Download gff for
BO27401.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17770-RA | 79..570 | 17..510 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:13 Download gff for
BO27401.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25811989..25812480 | 17..510 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:27 Download gff for
BO27401.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21637711..21638202 | 17..510 | 99 | | Plus |
BO27401.pep Sequence
Translation from 16 to 526
> BO27401.pep
MDFEFLTPPPEERTIRTHNLTEEQVKDLEIAFSLFDDQDTKVIPITNLRQ
LMLSVAHYPSDMELQEIQAEIDADGSGELYLSDFLHIMSQRYANMSTEDE
IIAAFRVFDKEGTGLISESEFRHIMQNMGEQLTDDEVEEIIRDANSDLEG
NIDYVRFVRMMSTTASFLDH
BO27401.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:17:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17770-PA | 164 | CG17770-PA | 1..164 | 1..164 | 833 | 100 | Plus |
CG5024-PB | 165 | CG5024-PB | 3..165 | 2..164 | 516 | 58.9 | Plus |
CG5024-PA | 165 | CG5024-PA | 3..165 | 2..164 | 516 | 58.9 | Plus |
Cam-PD | 149 | CG8472-PD | 5..148 | 20..163 | 337 | 45.1 | Plus |
Cam-PC | 149 | CG8472-PC | 5..148 | 20..163 | 337 | 45.1 | Plus |