BO27447.complete Sequence
706 bp assembled on 2010-08-18
GenBank Submission: KX798804
> BO27447.complete
GAAGTTATCAGTCGACATGCCCCACTGCCACACAATGGTCTATATGCGAA
TTGTGCTAACAACCTTGGTGACCATTACGTGTCTGCTGGGGGACAACTTT
GTGGAGCTGACCCAGCATCCATTGCTGAAGGCCCTGGCCGACAATGCCAC
CCATGCGGCCATTGGAGCACTCACGGGAATCACGTTCGCCACACAATTCT
ACGAGCGCACCTCGCAGTTGTTCGGCTGGATATTGATTTTCACCTGCTTC
GTTGTGTCATCGTTCATTGACTTGGACCACTTTGTGGAGGCTCGTTCCCT
TTATTTGGAGGATGCCACCAATCTGTCGAAGAGGCCCTTCCTCCACTGCT
CCAGCATTATAGTGGTTATGCTGCTGTTCTACATGTGCACCGCCTGTTTG
AACTATTTCCGGACCAGCCTAATGCTGGGATCCCTACTCTGTGCCTTCAT
CACACACCACACCAGGGACGCCGTGCGGCGGGGCTACTGGCTGTGCCCGC
TAGGTCACACGGACAGGATGCCCCAGCTAGCCTACATATTGACCACCATC
CTGACGCCCCATCTGCTGGGCTGCCTGCACAACGTGTGCCGCAGCGCAAC
CGTGCTTAACTTCCTGGGGCAGTACGTCAAGCTAAGCGAGGGCCAATACC
GCAGCGGCTCCACTGCCAACTATCGCTACATGCAGGTCGCAAGCTTTCTA
GACCAT
BO27447.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:41:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10866-RB | 675 | CG10866-PB | 1..672 | 17..688 | 3360 | 100 | Plus |
| CG10866-RA | 675 | CG10866-PA | 1..672 | 17..688 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:41:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10866-RB | 1874 | CG10866-RB | 247..918 | 17..688 | 3360 | 100 | Plus |
| CG10866-RA | 1337 | CG10866-RA | 247..918 | 17..688 | 3360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:41:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3937016..3937395 | 688..309 | 1900 | 100 | Minus |
| 3L | 28110227 | 3L | 3937452..3937746 | 311..17 | 1475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:41:06 has no hits.
BO27447.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:46 Download gff for
BO27447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10866-RA | 196..867 | 17..690 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:38 Download gff for
BO27447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10866-RA | 196..867 | 17..690 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:23 Download gff for
BO27447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10866-RA | 247..918 | 17..690 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:23 Download gff for
BO27447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3937014..3937393 | 311..690 | 99 | <- | Minus |
| 3L | 3937453..3937746 | 17..310 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:38 Download gff for
BO27447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3937014..3937393 | 311..690 | 99 | <- | Minus |
| arm_3L | 3937453..3937746 | 17..310 | 100 | | Minus |
BO27447.pep Sequence
Translation from 16 to 706
> BO27447.pep
MPHCHTMVYMRIVLTTLVTITCLLGDNFVELTQHPLLKALADNATHAAIG
ALTGITFATQFYERTSQLFGWILIFTCFVVSSFIDLDHFVEARSLYLEDA
TNLSKRPFLHCSSIIVVMLLFYMCTACLNYFRTSLMLGSLLCAFITHHTR
DAVRRGYWLCPLGHTDRMPQLAYILTTILTPHLLGCLHNVCRSATVLNFL
GQYVKLSEGQYRSGSTANYRYMQVASFLDH
BO27447.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:18:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10866-PB | 224 | CG10866-PB | 1..224 | 1..224 | 1189 | 100 | Plus |
| CG10866-PA | 224 | CG10866-PA | 1..224 | 1..224 | 1189 | 100 | Plus |
