BO27471.complete Sequence
589 bp assembled on 2010-08-18
> BO27471.complete
GAAGTTATCAGTCGACATGGCAGGGTCCATCCGTTTCAGAATGGGTCCAA
TTACACTATTGCTTTCGATACTCTTGGTTCATAGTTGTCGAGCCGAAAAG
CCGTACAGTGTGGAGCTAAACACCTTTACGATGGACGACACCATCGAAAA
TCAGGAAAATTGGGTAGACTGGGGAACGCTGAGTATGAAAAAGGTCTCAC
GAAATCAATTTGTGGTTAGCGGAGACTTTGAATTCAAACTCAATATGGCC
GATGAGCAGAAGATTGTTCTCATGGTTTATGTCTACGATTCCAATGCCAA
TCAAAGGGGTTCGATGGTAATGGCTGTTAAAAAGCCGTTCTGTCAGTTCA
TTAAAGAGGATGAGGACTCGTATCCAAGCATACAAAAGGCTTCCAATTTA
CCGGATCAGGATACGTGCCCATTTCCGAAAGGCAAATATACTATCGATAA
CTACGAATTGGAGACCAATTTCCTACCGGACAATGCACCCAAAGGCGACT
ATCTGTTGCAGTTATCCTTGTTGGATCGTGAGGTCCCAGTAGCAGGACTT
GTGGCTACTGTTACCCTGACTGCAAGCTTTCTAGACCAT
BO27471.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:56:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CheA7a-RA | 534 | CG15033-PA | 1..531 | 41..571 | 2640 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CheA7a-RA | 721 | CG15033-RA | 10..564 | 17..571 | 2760 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7378486..7378796 | 261..571 | 1540 | 99.7 | Plus |
X | 23542271 | X | 7378149..7378394 | 17..262 | 1230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:56:12 has no hits.
BO27471.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:49 Download gff for
BO27471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CheA7a-RA | 1..531 | 41..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:39:10 Download gff for
BO27471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CheA7a-RA | 10..564 | 17..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:14:03 Download gff for
BO27471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CheA7a-RA | 10..564 | 17..573 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:14:03 Download gff for
BO27471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7378149..7378394 | 17..262 | 100 | -> | Plus |
X | 7378488..7378796 | 263..573 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:39:10 Download gff for
BO27471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7272182..7272427 | 17..262 | 100 | -> | Plus |
arm_X | 7272521..7272829 | 263..573 | 99 | | Plus |
BO27471.pep Sequence
Translation from 16 to 589
> BO27471.pep
MAGSIRFRMGPITLLLSILLVHSCRAEKPYSVELNTFTMDDTIENQENWV
DWGTLSMKKVSRNQFVVSGDFEFKLNMADEQKIVLMVYVYDSNANQRGSM
VMAVKKPFCQFIKEDEDSYPSIQKASNLPDQDTCPFPKGKYTIDNYELET
NFLPDNAPKGDYLLQLSLLDREVPVAGLVATVTLTASFLDH
BO27471.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:19:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CheA7a-PA | 177 | CG15033-PA | 1..177 | 9..185 | 925 | 100 | Plus |