BO27484.complete Sequence
610 bp assembled on 2010-08-18
GenBank Submission: KX794297
> BO27484.complete
GAAGTTATCAGTCGACATGAAGTGCCTCCTGGTGACGATAGCCTGTTTGA
TCACGTGCTCCAGTGTGGGTGCCCTCGTGCACTATATGAAACTGGAAAAA
GGAAAGAACGGATGCAAATCGCCCAAGGGTACAGAGATGGCTGTGGGTGC
TGTTGAGCAGGATGAAAAGACTTGTGGAGCTCTTACTTGTCAAAATACGG
AAGGGGATGCCTTCATCCACTACTGTCAGATACCTGCCTCTTTTGCGGAA
TGTGTGGAGACCGCTGTTCTGACGGACGTTGACTTTCCACAATGCTGTTG
GACTTGTGCCGATTGGGCGGACTGCGATGGAGAAGAACCTGGACCAGGGG
ATGAAGCTCCTGCTGCCGACGGAGCTGCTGACGCACCACCTCCTGCTGCA
AGAACCCATGCAAGAAATTCTAAGTACCAGGCAACTACAACTGATACTAC
AGAAAGTGAAAGGCCACGCAGCAAAGGAAAATGGGGTTCCAAGAGGAGCA
CTACCACATCCGATGAATCCGAATTTCCCGAGGGAATCAATATAAGGTTT
GGCGGTGGAACACCGATCTCCAAGTTTGGCGAAGACAGCATTGCAAGCTT
TCTAGACCAT
BO27484.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:56:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34460-RA | 579 | CG34460-PA | 1..576 | 17..592 | 2880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34460-RA | 714 | CG34460-RA | 27..602 | 17..592 | 2880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16827274..16827643 | 223..592 | 1850 | 100 | Plus |
| 2R | 25286936 | 2R | 16827042..16827159 | 105..222 | 590 | 100 | Plus |
| 2R | 25286936 | 2R | 16826898..16826985 | 17..104 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:56:26 has no hits.
BO27484.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:50 Download gff for
BO27484.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34460-RA | 2..577 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:39:18 Download gff for
BO27484.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34460-RA | 27..602 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:14:11 Download gff for
BO27484.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34460-RA | 27..602 | 17..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:14:11 Download gff for
BO27484.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16827042..16827159 | 105..222 | 100 | -> | Plus |
| 2R | 16826898..16826985 | 17..104 | 100 | -> | Plus |
| 2R | 16827274..16827643 | 223..594 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:39:18 Download gff for
BO27484.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12714403..12714490 | 17..104 | 100 | -> | Plus |
| arm_2R | 12714547..12714664 | 105..222 | 100 | -> | Plus |
| arm_2R | 12714779..12715148 | 223..594 | 99 | | Plus |
BO27484.pep Sequence
Translation from 16 to 610
> BO27484.pep
MKCLLVTIACLITCSSVGALVHYMKLEKGKNGCKSPKGTEMAVGAVEQDE
KTCGALTCQNTEGDAFIHYCQIPASFAECVETAVLTDVDFPQCCWTCADW
ADCDGEEPGPGDEAPAADGAADAPPPAARTHARNSKYQATTTDTTESERP
RSKGKWGSKRSTTTSDESEFPEGINIRFGGGTPISKFGEDSIASFLDH
BO27484.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:19:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34460-PA | 192 | CG34460-PA | 1..192 | 1..192 | 1049 | 100 | Plus |
