BO27506.complete Sequence
280 bp assembled on 2010-08-18
GenBank Submission: KX793751
> BO27506.complete
GAAGTTATCAGTCGACATGAAACTGTTGATTTTGGTTTTCGTGTTTGTCG
CTTTTGTGGCCAACGCCTTGGCCCTGAAAAATGCAATCTGTGGTCTACCC
CATTCCCTAAACGGAGATGGCAGAATATCCTGTGAGGCCTATATACCCAG
TTGGTCCTACGACGCCGATCGAAACGAGTGCGTCAAATTTATCTACGGAG
GCTGCGGAGGCAATAACAATAGATTTAATTCGAGGGAAATCTGTGAAGAC
AAGTGTTTGCAAGCAAGCTTTCTAGACCAT
BO27506.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:50:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16713-RA | 249 | CG16713-PA | 1..246 | 17..262 | 1230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:50:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16713-RA | 325 | CG16713-RA | 56..301 | 17..262 | 1230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:50:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3695056..3695235 | 262..83 | 900 | 100 | Minus |
2L | 23513712 | 2L | 3695290..3695356 | 83..17 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:50:02 has no hits.
BO27506.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:57:18 Download gff for
BO27506.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16713-RA | 51..296 | 17..264 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:33:48 Download gff for
BO27506.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16713-RA | 56..301 | 17..264 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:27:32 Download gff for
BO27506.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16713-RA | 56..301 | 17..264 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:27:32 Download gff for
BO27506.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3695054..3695234 | 84..264 | 98 | <- | Minus |
2L | 3695290..3695356 | 17..83 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:33:48 Download gff for
BO27506.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3695054..3695234 | 84..264 | 98 | <- | Minus |
arm_2L | 3695290..3695356 | 17..83 | 100 | | Minus |
BO27506.pep Sequence
Translation from 16 to 280
> BO27506.pep
MKLLILVFVFVAFVANALALKNAICGLPHSLNGDGRISCEAYIPSWSYDA
DRNECVKFIYGGCGGNNNRFNSREICEDKCLQASFLDH
BO27506.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:19:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16713-PA | 82 | CG16713-PA | 1..82 | 1..82 | 446 | 100 | Plus |
CG16712-PB | 82 | CG16712-PB | 1..80 | 1..80 | 253 | 56.2 | Plus |
CG16712-PA | 82 | CG16712-PA | 1..80 | 1..80 | 253 | 56.2 | Plus |
Acp24A4-PC | 78 | CG31779-PC | 1..78 | 1..82 | 245 | 57.3 | Plus |
Acp24A4-PB | 78 | CG31779-PB | 1..78 | 1..82 | 245 | 57.3 | Plus |