Clone BO27512 Report

Search the DGRC for BO27512

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:275
Well:12
Vector:pDNR-Dual
Associated Gene/TranscriptCG9619-RA
Protein status:BO27512.pep: Imported from assembly
Sequenced Size:2077

Clone Sequence Records

BO27512.complete Sequence

2077 bp assembled on 2010-12-13

GenBank Submission: KX797232

> BO27512.complete
GAAGTTATCAGTCGACATGAACGATCCCGGCGATATACCACTGACACACA
CAAGCACTCCGGACAGCAGGCCGCCCTGCAGCATCATTTCCATCATACCC
ACCATAGGGATGTCCTCATGTCGCGGAAGAGCCGAGGCATTCGCACGGAG
TCTGTCCTCCAAGCTGCGCACCTTGGGATCACAGACAACCGAGGAGGGCG
AGGGCAACGCGGAGGATGAGCCGATCATAAATGGAACCAGCACGAACACG
TGGGTCAACTCGCACGACTCGGAGCAGACGGTGACGGACCTGCAGCCACT
GCGCCATGAGTCCGACTCCTTCTTCGACTTCGACTGCGAGCTGGAGTCGC
CGGGGAGTCCTGTGGACGAGTGCGAGTACCTGCGCTTGATCGAAACTGCC
TCGAATACGCCGCACAACTCTACGGCGGAGTCGGGCTATGCCTGCGCTTC
AATGGCCAGCAGCCATAGTAGCAGCAATGATGGTCCGTACTTTGATGCAT
CCGCTTCCACATCCACAGCTGCAGCTGCCCAGGATCAGACGCTGCCAGCC
TCGGAACACAAAGAGTATGTAAATACCCTACAACTAAACGGAAAGCATGG
ACTGGCCAATGGAGTGCAGGAGGAGCAGCCAGCTTTCCAGGATGATGTGC
AGGAGGACGAGGCCTTCTTGCAGGCACAGATCCTCAATGAGCTCCAGAAG
CACAGCAACAGTTTGACGGAAGTGGAGCAGACAAAGCCCGAGGAGGGCAA
GCTCACCAATGGGCATCTCGAGAAGGTGGAGGAGCTGGAACTGAAGGACG
TCCTGGAGGTAGCTGGTACTACAAACAGAGCTCCAAAGGTGATCGCCGCT
CCACAAGAAGTGGAAGCCTTTGCTGATAGAAGCCAAGAGCAATCACCTAA
TGACAGAGTTCAAAAAGAAAGCTCCCAGGAAAGGGTTCCAGAAGGAACTC
CATTCGAAGGAGTCCAAGGAGAATCTCCTAGCGACAGAGTCCAGACGGAC
GCGTCCGATGAAAGGGTTCAAGAGGAAATTTCCAACGATACTGTTCAAGT
GGAATCCAACCACAAATCCGCCACAGAATCAATTTCCACCGAGGTAACCA
CGTTGGAAAGATCACCAGAGGAAAGCAGGAATGATGAACTCTCGCCAGAC
AGTGGTGTGGATGAAACAGACAAGTCGGCCAGTAATCTCACCGTAGATGT
GGACCTGGCCCAAATCGAACAGGCCAAACAGGATGCCACTGAGGCTGTGG
AAAAGAGTGGTGCCCCCAGTCGGGGTACCACAGTCGATACCACAGATGAT
GAAGACGATTGTAGACCACAGCGCATCAGGCGTTGTTCCTCCCTGAAAAC
GGGAAAGACACCACCCGGAACTCCGGGTCGCAAGAAGATCGTTAGGTTTG
CCGACGTCCTTGGCTTGGATCTGGCCGATGTAAAGACCTTCCTGGACGAG
ATACCCACCATACCGAAATCGGCGTTCGAGGACCTGGAAATACTGGAGTC
GGAGCCGCCACTTCAGCTGGGGCCCAAGTCCGACAAGCTATTGATGCCTC
TGTTCCAGCAGCCAGGAGGCCTGCCCAAGTTCCTCGATGCGGTCCGGGAG
AAGCAGGTGTCCCTGGAGAACGCTGCCGTGACGGACAACATCAACCAGAC
GATATCCGGATCTGTGCGTGTGCGCAATCTGGACTTTCACAAGTCGGTGC
ACATAAGGTACTCGCTGGACGGATGGAGAAGCTACGCCGACCTGCAGGCA
AACTACGTGGAGAACTCTTGCGATGGCTTCTCCGACATCTTCACCTTCGT
GCTGTTCGGTAACTCGCTGCACGTGGGCCAGAGGCTGGAGTTCGCCGTAA
GGTTCCAGTGCAAAGGCCAACAGTTCTGGGACAACAACTACGGGGCCAAC
TACTGCTTCCAGTGTTTGCCCAGCTCGACACATACCGCCGGCGGCTCCAC
GGCATCGCCTCCGTCTGTGGCGACTGGCGCCGTATCCACCGGCCATAGTG
CCAGTCTGGTCGGATTGCTAAGCCCCACGGCGGGCGATGCCTGGTGCAGC
TCCTTCTACGCAAGCTTTCTAGACCAT

BO27512.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:17
Subject Length Description Subject Range Query Range Score Percent Strand
Gbs-76A-RD 2046 CG9619-PD 1..2043 17..2059 10200 100 Plus
Gbs-76A-RC 2046 CG9619-PC 1..2043 17..2059 10200 100 Plus
Gbs-76A-RB 2046 CG9619-PB 1..2043 17..2059 10200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
Gbs-76A-RD 5214 CG9619-RD 1310..3352 17..2059 10200 100 Plus
Gbs-76A-RC 4408 CG9619-RC 1068..3110 17..2059 10200 100 Plus
Gbs-76A-RB 3556 CG9619-RB 216..2258 17..2059 10200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19283226..19285103 2059..182 9375 99.9 Minus
3L 28110227 3L 19285224..19285391 184..17 840 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:41:15 has no hits.

BO27512.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:54:58 Download gff for BO27512.complete
Subject Subject Range Query Range Percent Splice Strand
CG9619-RA 201..2243 17..2061 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:23 Download gff for BO27512.complete
Subject Subject Range Query Range Percent Splice Strand
Gbs-76A-RA 201..2243 17..2061 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:15 Download gff for BO27512.complete
Subject Subject Range Query Range Percent Splice Strand
Gbs-76A-RB 216..2258 17..2061 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:15 Download gff for BO27512.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19283224..19285100 185..2061 99 <- Minus
3L 19285224..19285391 17..184 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:23 Download gff for BO27512.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19276324..19278200 185..2061 99 <- Minus
arm_3L 19278324..19278491 17..184 100   Minus

BO27512.pep Sequence

Translation from 16 to 2077

> BO27512.pep
MNDPGDIPLTHTSTPDSRPPCSIISIIPTIGMSSCRGRAEAFARSLSSKL
RTLGSQTTEEGEGNAEDEPIINGTSTNTWVNSHDSEQTVTDLQPLRHESD
SFFDFDCELESPGSPVDECEYLRLIETASNTPHNSTAESGYACASMASSH
SSSNDGPYFDASASTSTAAAAQDQTLPASEHKEYVNTLQLNGKHGLANGV
QEEQPAFQDDVQEDEAFLQAQILNELQKHSNSLTEVEQTKPEEGKLTNGH
LEKVEELELKDVLEVAGTTNRAPKVIAAPQEVEAFADRSQEQSPNDRVQK
ESSQERVPEGTPFEGVQGESPSDRVQTDASDERVQEEISNDTVQVESNHK
SATESISTEVTTLERSPEESRNDELSPDSGVDETDKSASNLTVDVDLAQI
EQAKQDATEAVEKSGAPSRGTTVDTTDDEDDCRPQRIRRCSSLKTGKTPP
GTPGRKKIVRFADVLGLDLADVKTFLDEIPTIPKSAFEDLEILESEPPLQ
LGPKSDKLLMPLFQQPGGLPKFLDAVREKQVSLENAAVTDNINQTISGSV
RVRNLDFHKSVHIRYSLDGWRSYADLQANYVENSCDGFSDIFTFVLFGNS
LHVGQRLEFAVRFQCKGQQFWDNNYGANYCFQCLPSSTHTAGGSTASPPS
VATGAVSTGHSASLVGLLSPTAGDAWCSSFYASFLDH

BO27512.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
Gbs-76A-PD 681 CG9619-PD 1..681 1..681 3525 100 Plus
Gbs-76A-PC 681 CG9619-PC 1..681 1..681 3525 100 Plus
Gbs-76A-PB 681 CG9619-PB 1..681 1..681 3525 100 Plus
Gbs-76A-PA 681 CG9619-PA 1..681 1..681 3525 100 Plus
Gbs-70E-PA 330 CG9238-PA 101..276 454..629 175 28.9 Plus