BO27514.complete Sequence
592 bp assembled on 2010-08-18
GenBank Submission: KX795244
> BO27514.complete
GAAGTTATCAGTCGACATGTCGTCGGAGCAGCCGGAGAACACCAGCTACG
AGCAGGAATGCCAACGGGCGGAGCTGCTGGGCCTCCAGCCACCGGATCCC
GCGGAGTTCGAGCGCAAACGGCAGGCACGACTGGAGCACGAGTTGGCCGA
GCAAGAGGCCGCCGAGGCGGTGCTGCTGGAGCAACAAGACGAGAGTCTGG
GCAATGTGGGCGGCAAGCTGGGCGAGCTCAATAGCATCCTGTCCAGCACG
CAGCAGAAGCTGAATCGCTTCAAGCAAACGGCATGTGGCAGTTTGACCAA
CATATTTGCCCGGGCCAGCTCGGGCTCGGTGGATCTTTCGGCGGGCATTG
GTAGATCGGGCTCAATCGCCTCCACACAGGAGGAGCGTCCTCCTGTCCAG
GAACAGCCACTGGCCAAGCCTCCGCCGACGGCTGCCGAGGTCAGCGCCGC
CAAGGCGGCCAAGCAGAAGCGCATGGACTCGCAGCTGGACAAGCTGGATG
CGCTGATCAACCAGGCGGACAACGCTCAGATAGCCATGAGTGAGCAGACA
CAGCAGATGCGCCGCCTGGCCAAGGCAAGCTTTCTAGACCAT
BO27514.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:47:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32544-RB | 561 | CG32544-PB | 1..558 | 17..574 | 2775 | 99.8 | Plus |
| CG32544-RA | 561 | CG32544-PA | 1..558 | 17..574 | 2775 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:47:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32544-RB | 1527 | CG32544-RB | 30..588 | 16..574 | 2780 | 99.8 | Plus |
| CG32544-RA | 1630 | CG32544-RA | 30..588 | 16..574 | 2780 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:47:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18860520..18860922 | 172..574 | 2000 | 99.8 | Plus |
| X | 23542271 | X | 18860313..18860469 | 16..172 | 785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:47:50 has no hits.
BO27514.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:57:10 Download gff for
BO27514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32544-RA | 31..588 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:33:09 Download gff for
BO27514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32544-RA | 31..588 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:26:43 Download gff for
BO27514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32544-RA | 31..588 | 17..576 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:26:43 Download gff for
BO27514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18860314..18860469 | 17..172 | 100 | -> | Plus |
| X | 18860521..18860922 | 173..576 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:33:09 Download gff for
BO27514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18754554..18754955 | 173..576 | 99 | | Plus |
| arm_X | 18754347..18754502 | 17..172 | 100 | -> | Plus |
BO27514.pep Sequence
Translation from 16 to 592
> BO27514.pep
MSSEQPENTSYEQECQRAELLGLQPPDPAEFERKRQARLEHELAEQEAAE
AVLLEQQDESLGNVGGKLGELNSILSSTQQKLNRFKQTACGSLTNIFARA
SSGSVDLSAGIGRSGSIASTQEERPPVQEQPLAKPPPTAAEVSAAKAAKQ
KRMDSQLDKLDALINQADNAQIAMSEQTQQMRRLAKASFLDH
BO27514.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:19:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32544-PB | 186 | CG32544-PB | 1..186 | 1..186 | 918 | 100 | Plus |
| CG32544-PA | 186 | CG32544-PA | 1..186 | 1..186 | 918 | 100 | Plus |
