BO27527.complete Sequence
1000 bp assembled on 2010-08-18
GenBank Submission: KX794407
> BO27527.complete
GAAGTTATCAGTCGACATGCTCAAGAACTGGACAATAAATACGTTCCTTT
TGGTTTCGTTTCTTTGTAGTGCGACTGGGCAAAATGAAGGAGGAGCACCT
GGAATATTCAACGGAATGTCATTCACGGAAAATCTTCAACCAGACCCAAA
TCAAGTTTGCGGCATGAGCAATCCAAATGGCTTGGTGGCCAATGTGAAGG
TGCCCAAAGATTACTCCACACCTGGCCAATTTCCATGGGTGGTTGCCCTT
TTCAGTCAGGGAAAATACTTTGGGGCCGGTTCTTTGATTGCCCCAGAAGT
AGTCCTTACAGCGGCTAGCATTGTGGTGGGCAAGACTGATGCGGAAATTG
TGGTGAGAGCAGGCGAATGGAATACGGGACAACGCAGTGAATTCCTACCG
TCGGAGGATCGTCCGGTGGCCAGAGTTGTGCAACACAGGGAGTTTTCGTA
TTTATTGGGAGCCAATAACATTGCCCTTCTGTTCCTAGCCAACCCATTTG
AGTTGAAAAGCCACATCCGAACCATCTGCTTGCCCAGCCAGGGAAGGTCC
TTCGATCAGAAGCGCTGCTTGGTGACCGGATGGGGAAAGGTGGCATTCAA
CGATGAAAATTACTCAAATATCCAAAAGAAAATCGAACTGCCGATGATTA
ACAGGGCGCAGTGCCAGGATCAGTTGAGAAACACCAGATTGGGCGTCTCG
TTTGATCTGCCTGCTAGTCTGATATGCGCCGGCGGCGAGAAGGATGCGGG
AGACTGCCTCGGCGACGGAGGATCCGCTCTATTCTGCCCCATGGAGGCGG
ACCCATCGCGCTATGAGCAGGCTGGCATCGTTAACTGGGGCATCGGCTGT
CAAGAGGAAAACGTTCCAGCAGTCTACACAAATGTTGAAATGTTTCGGGA
TTGGATCTATGAGCACATGGCCCAGAACTCCAACAGTGTTCCATTCGCTG
CTGGTCAGTTACCATCGAACTATAAACAGGAAGCAAGCTTTCTAGACCAT
BO27527.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:46:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14990-RA | 969 | CG14990-PA | 1..966 | 17..982 | 4830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:47:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14990-RA | 1072 | CG14990-RA | 32..998 | 16..982 | 4835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:46:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4093383..4094270 | 95..982 | 4440 | 100 | Plus |
| 3L | 28110227 | 3L | 4093238..4093317 | 16..95 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:46:57 has no hits.
BO27527.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:57:08 Download gff for
BO27527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14990-RA | 34..999 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:32:54 Download gff for
BO27527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14990-RA | 33..998 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:26:22 Download gff for
BO27527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14990-RA | 33..998 | 17..984 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:26:22 Download gff for
BO27527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4093239..4093316 | 17..94 | 100 | -> | Plus |
| 3L | 4093383..4094270 | 95..984 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:32:54 Download gff for
BO27527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4093239..4093316 | 17..94 | 100 | -> | Plus |
| arm_3L | 4093383..4094270 | 95..984 | 99 | | Plus |
BO27527.pep Sequence
Translation from 16 to 1000
> BO27527.pep
MLKNWTINTFLLVSFLCSATGQNEGGAPGIFNGMSFTENLQPDPNQVCGM
SNPNGLVANVKVPKDYSTPGQFPWVVALFSQGKYFGAGSLIAPEVVLTAA
SIVVGKTDAEIVVRAGEWNTGQRSEFLPSEDRPVARVVQHREFSYLLGAN
NIALLFLANPFELKSHIRTICLPSQGRSFDQKRCLVTGWGKVAFNDENYS
NIQKKIELPMINRAQCQDQLRNTRLGVSFDLPASLICAGGEKDAGDCLGD
GGSALFCPMEADPSRYEQAGIVNWGIGCQEENVPAVYTNVEMFRDWIYEH
MAQNSNSVPFAAGQLPSNYKQEASFLDH
BO27527.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14990-PA | 322 | CG14990-PA | 1..322 | 1..322 | 1715 | 100 | Plus |
| CG18478-PA | 294 | CG18478-PA | 21..287 | 38..304 | 720 | 50.2 | Plus |
| CG31827-PA | 294 | CG31827-PA | 21..287 | 38..304 | 720 | 50.2 | Plus |
| SPH93-PA | 494 | CG6639-PA | 214..486 | 23..301 | 703 | 50 | Plus |
| CG3117-PB | 347 | CG3117-PB | 82..334 | 51..303 | 659 | 47.8 | Plus |
