BO27534.complete Sequence
991 bp assembled on 2010-09-23
GenBank Submission: KX796894
> BO27534.complete
GAAGTTATCAGTCGACATGACCACCGCCGCCTCCACATCGCAGCATGCGA
CATCGTCCTCCACAATGATGGCGGGCTCTGGATCCTTGGCGACCTCGTCG
TCCGCCGCTGCCCCCACAACCACGCCCAGCAGCTCGGCCGTTCGCGCCCT
GGCCATGGAGTACAAGTCGCTGCAGGAAGAGCCGGTGGAGGGATTCCGCG
TCAAGCTGATCAACGACGACAATCTGTTCGAATGGGAGGTGGCAATCTTC
GGGCCACCGGACACCCTCTACCAGGGCGGCTACTTCAAGGCGCACATGAA
GTTCCCGCACGACTATCCATACTCACCGCCATCCATACGCTTCCTGACGA
AGGTCTGGCATCCGAATGTTTACGAGAACGGTGATCTGTGCATATCCATA
CTACATCCGCCGGTGGATGATCCGCAGAGTGGCGAGCTGCCCTGCGAACG
CTGGAATCCCACGCAGAATGTGCGCACCATCCTGCTGTCGGTCATATCGC
TGCTCAATGAGCCGAACACATTCTCGCCGGCCAACGTGGACGCCTCGGTC
ATGTACCGCCGATGGCGGGACTCACAGGGTAAGGACAATGAGTATCCAAA
CATCATACGAAAACAGGCACTGGCCGCCAATGCCGAGGCCAAGCGGGAGG
GCATTGTGGTTCCGATGACCCTGGAGGACTACTGCCTGAAGCCCACGCGC
AAGCCCACAACGGAGTCTGGCCTGGATGCCAACTTCTACGATGATGATTT
CGATCTGGAGACGGAGGATGATCTGCCATCTGATGATGACTTCGATGAGG
ACGACGACGATGATGAGGACGAGGATGAAGATGAGGACAGTGCCACGGCG
CCGATTAGCAAAAATAATGGAGGCAGCAGCAAGTGCAAGAACAACGGGCT
GGTCAGAGAGGCGGCCGCCGCCGGAGCGGACGATGCCGAATCCGCTGATG
ACAGCGGCAAGGGCGAGACCACAGCAAGCTTTCTAGACCAT
BO27534.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:59:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7656-RE | 960 | CG7656-PE | 1..957 | 17..973 | 4785 | 100 | Plus |
| CG7656-RD | 960 | CG7656-PD | 1..957 | 17..973 | 4785 | 100 | Plus |
| CG7656-RF | 954 | CG7656-PF | 1..951 | 17..973 | 4660 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:59:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7656-RE | 1234 | CG7656-RE | 153..1109 | 17..973 | 4785 | 100 | Plus |
| CG7656-RD | 1410 | CG7656-RD | 303..1259 | 17..973 | 4785 | 100 | Plus |
| CG7656-RF | 2027 | CG7656-RF | 303..1253 | 17..973 | 4660 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:59:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15587004..15587565 | 578..17 | 2810 | 100 | Minus |
| 3L | 28110227 | 3L | 15586205..15586603 | 973..575 | 1995 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:59:20 has no hits.
BO27534.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-23 10:58:36 Download gff for
BO27534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7656-RD | 101..1057 | 17..975 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:32 Download gff for
BO27534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7656-RD | 303..1259 | 17..975 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:08:31 Download gff for
BO27534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7656-RD | 303..1259 | 17..975 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:08:31 Download gff for
BO27534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15586203..15586600 | 578..975 | 99 | <- | Minus |
| 3L | 15587005..15587565 | 17..577 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:32 Download gff for
BO27534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15579303..15579700 | 578..975 | 99 | <- | Minus |
| arm_3L | 15580105..15580665 | 17..577 | 100 | | Minus |
BO27534.pep Sequence
Translation from 16 to 991
> BO27534.pep
MTTAASTSQHATSSSTMMAGSGSLATSSSAAAPTTTPSSSAVRALAMEYK
SLQEEPVEGFRVKLINDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPHDY
PYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQ
NVRTILLSVISLLNEPNTFSPANVDASVMYRRWRDSQGKDNEYPNIIRKQ
ALAANAEAKREGIVVPMTLEDYCLKPTRKPTTESGLDANFYDDDFDLETE
DDLPSDDDFDEDDDDDEDEDEDEDSATAPISKNNGGSSKCKNNGLVREAA
AAGADDAESADDSGKGETTASFLDH
BO27534.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:33:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7656-PE | 319 | CG7656-PE | 1..319 | 1..319 | 1688 | 100 | Plus |
| CG7656-PD | 319 | CG7656-PD | 1..319 | 1..319 | 1688 | 100 | Plus |
| CG7656-PF | 317 | CG7656-PF | 1..317 | 1..319 | 1664 | 99.4 | Plus |
| CG7656-PA | 317 | CG7656-PA | 1..317 | 1..319 | 1664 | 99.4 | Plus |
| CG40045-PA | 168 | CG40045-PA | 10..148 | 45..186 | 433 | 54.2 | Plus |
