BO27535.complete Sequence
718 bp assembled on 2010-08-18
GenBank Submission: KX799677
> BO27535.complete
GAAGTTATCAGTCGACATGTTGTGTCCGCCAATGGCCCTGGGCCCATTTC
TCGCCGCCCCCGTGCCACGCCCACCGCCCAGCGCATCGGAGAAGAAGAGA
ATCTGTCGGAACCTATTCAATAACGCTCCCGGGGACTCGAATATCGATCA
GCTGTTGGCCCAGGAGCAGCACACGCAGAGATTATACGTTAAGGAACGCT
ACGGATATGACATCCAGCTGGAATCTAATCGGGATGCGGATGCGAATACG
GATGCGGATGCTGATACGGATGCCCATTGTCAGGTCCTGCGCGGAATGCG
GTATCCGACCTCAAGGACGATATCCAGCACCGATGCCGATGAGTGCAATC
CAAAGGCAGTCAGCCAAGCGCCGAGGGGCATGGCCCTGACTCCCGCCCAG
ATCTCCGCCAGCGCAAAGCTGATCCTTCAGAAATGCCCGGAAAGCGATCG
CAAAAAAAGCAACGGCAGTGCGGATTTGGCCAACTGCACGCGACATGGCC
AAAAGCCATATGCGAGGCAGCCACAAGGCCTCAAAGGCATGTACAATGTT
CGCAAGACCGTGAATGGTATTTCGAAACCCAACGTCAAGAATGGTTACAA
CAACAACAACAACAGCAGCAGCAGCAACAACAACAGCAACATGAATATTA
ATAATAAGATTGTGGATAATGGTACTAGCGAATTGGCAGATCAGAAGCAG
GCAAGCTTTCTAGACCAT
BO27535.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:47:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glec-RA | 687 | CG6575-PA | 1..684 | 17..700 | 3420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:47:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glec-RA | 2050 | CG6575-RA | 347..1031 | 16..700 | 3425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:47:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21855399..21855920 | 537..16 | 2610 | 100 | Minus |
3R | 32079331 | 3R | 21851713..21851878 | 700..535 | 830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:47:21 has no hits.
BO27535.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:57:09 Download gff for
BO27535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glec-RA | 349..1027 | 22..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:33:04 Download gff for
BO27535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glec-RA | 353..1031 | 22..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:26:30 Download gff for
BO27535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glec-RA | 353..1031 | 22..702 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:26:30 Download gff for
BO27535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21851711..21851876 | 537..702 | 98 | <- | Minus |
3R | 21855400..21855914 | 22..536 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:33:04 Download gff for
BO27535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17677433..17677598 | 537..702 | 98 | <- | Minus |
arm_3R | 17681122..17681636 | 22..536 | 100 | | Minus |
BO27535.pep Sequence
Translation from 16 to 718
> BO27535.pep
MLCPPMALGPFLAAPVPRPPPSASEKKRICRNLFNNAPGDSNIDQLLAQE
QHTQRLYVKERYGYDIQLESNRDADANTDADADTDAHCQVLRGMRYPTSR
TISSTDADECNPKAVSQAPRGMALTPAQISASAKLILQKCPESDRKKSNG
SADLANCTRHGQKPYARQPQGLKGMYNVRKTVNGISKPNVKNGYNNNNNS
SSSNNNSNMNINNKIVDNGTSELADQKQASFLDH
BO27535.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:18:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glec-PA | 228 | CG6575-PA | 1..228 | 1..228 | 1202 | 100 | Plus |