Clone BO27555 Report

Search the DGRC for BO27555

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:275
Well:55
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO27555.pep: Imported from assembly
Sequenced Size:544

Clone Sequence Records

BO27555.complete Sequence

544 bp assembled on 2010-08-18

> BO27555.complete
GAAGTTATCAGTCGACATGTCGTCGCAACTGCCAGCGGGAAGTGGACGTC
GAGAGTGGCAAGTGTGTGGGGCAAACTCCGGCCAGCGGCCAATGGCGGTT
GGCCGAGGCCACGCCCCGTGGCTCAATTACCGACCAGTGCTGCCCATCGG
CGGGCAGAGCGAAACCTGTTTCCACGAGCGAGAGGCAGTCAGGCGCATGT
GCGATCAGAGCGGGATGGATGGCTCAAGGGTGGACCAACCAGAAGAGGCA
GGTTGCTGGTATTATGGTAGGTTAGGTTCAAACAAGGTGGCAAACTGGCT
CTTAACCGAAATAGGAAGGAAGTCGGCAGCGGCGTCGACGTCGGGCAACT
GGTTTGACTTGTTTCCGGCTCACTCCAACAGCCCAAACCCACCAGCAATC
GGCAGAGGCAGCCAAGTCGGCAGAGGGCAGGCAGAGCAGCGGCCGTCGGC
ACAATTTGATTGCATTTATGAAAAGCGTTTTCGCCCGCTAGCACGCGTCC
GCTCCCAGCTCGCAATTCGCCATCCGGCAAGCTTTCTAGACCAT

BO27555.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 02:45:16 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
C15-RA 1856 CG7937-RA 1..37 490..526 185 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21499513..21500022 17..526 2550 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:45:15 has no hits.

BO27555.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:50 Download gff for BO27555.complete
Subject Subject Range Query Range Percent Splice Strand
CG31179-RA 434..943 17..528 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:09 Download gff for BO27555.complete
Subject Subject Range Query Range Percent Splice Strand
C15-RA 1..37 490..528 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:45 Download gff for BO27555.complete
Subject Subject Range Query Range Percent Splice Strand
C15-RA 1..37 490..528 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:45 Download gff for BO27555.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21499513..21500022 17..528 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:09 Download gff for BO27555.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17325235..17325744 17..528 99   Plus

BO27555.pep Sequence

Translation from 16 to 544

> BO27555.pep
MSSQLPAGSGRREWQVCGANSGQRPMAVGRGHAPWLNYRPVLPIGGQSET
CFHEREAVRRMCDQSGMDGSRVDQPEEAGCWYYGRLGSNKVANWLLTEIG
RKSAAASTSGNWFDLFPAHSNSPNPPAIGRGSQVGRGQAEQRPSAQFDCI
YEKRFRPLARVRSQLAIRHPASFLDH
Sequence BO27555.pep has no blast hits.