BO27563.complete Sequence
562 bp assembled on 2010-08-18
GenBank Submission: KX799970
> BO27563.complete
GAAGTTATCAGTCGACATGAACAAATGTTTTAGGTGCCAGCCCCGGATAT
CGCTTTTCCAGTTCAGCCTACCGCGGTGCTATGCCGCAGTGCAGCCGGGA
TGTCCACCGCCACAAGAAAAACCCGTCGTCGGTTTGCCACACAAGCCCGA
TCCCAAGACGGTGAAGTGCGACTATATAGGACCGCCAGACGCGCAATCAA
ACCTACGTCCGTACGTACGGCACTACGGCGATGAGGAGACGCGGCTGGCA
AGAAGCCTGCGTCTTAAGCGGATCGAGGTGGAGGCATGGAACACGGACTT
CTGGACAAAACACAATAAGCGCTTCTACGAGGAAAAGGAAGACTTCATCC
GCCTGCACAAGGAAAGCGGAACCAGCGAAGTGTCCGCGGACCAGATGAGC
CACTTCTACAAAGCGTTCCTCGACAAGAACTGGCGCATCCACATCATGTA
CAACATCTCCTGGTACCTGAAGAACTTCGACATACTCACCCTGGCTGCCG
CAGTCCAGCTCCAGAGGCTTCTGGCGCTGGCCAAGCGAAGATCTGCAAGC
TTTCTAGACCAT
BO27563.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:44:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14806-RB | 531 | CG14806-PB | 1..528 | 17..544 | 2640 | 100 | Plus |
| CG14806-RA | 531 | CG14806-PA | 1..528 | 17..544 | 2640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14806-RB | 770 | CG14806-RB | 43..570 | 17..544 | 2640 | 100 | Plus |
| CG14806-RA | 1019 | CG14806-RA | 292..819 | 17..544 | 2640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1880683..1880947 | 68..332 | 1325 | 100 | Plus |
| X | 23542271 | X | 1881018..1881232 | 330..544 | 1075 | 100 | Plus |
| X | 23542271 | X | 1880573..1880623 | 17..67 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:44:54 has no hits.
BO27563.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:46 Download gff for
BO27563.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14806-RA | 277..804 | 17..546 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:01 Download gff for
BO27563.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14806-RA | 292..819 | 17..546 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:35 Download gff for
BO27563.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14806-RA | 292..819 | 17..546 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:35 Download gff for
BO27563.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1881020..1881232 | 332..546 | 99 | | Plus |
| X | 1880573..1880623 | 17..67 | 100 | -> | Plus |
| X | 1880683..1880946 | 68..331 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:01 Download gff for
BO27563.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1774606..1774656 | 17..67 | 100 | -> | Plus |
| arm_X | 1774716..1774979 | 68..331 | 100 | -> | Plus |
| arm_X | 1775053..1775265 | 332..546 | 99 | | Plus |
BO27563.pep Sequence
Translation from 16 to 562
> BO27563.pep
MNKCFRCQPRISLFQFSLPRCYAAVQPGCPPPQEKPVVGLPHKPDPKTVK
CDYIGPPDAQSNLRPYVRHYGDEETRLARSLRLKRIEVEAWNTDFWTKHN
KRFYEEKEDFIRLHKESGTSEVSADQMSHFYKAFLDKNWRIHIMYNISWY
LKNFDILTLAAAVQLQRLLALAKRRSASFLDH
BO27563.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14806-PB | 176 | CG14806-PB | 1..176 | 1..176 | 960 | 100 | Plus |
| CG14806-PA | 176 | CG14806-PA | 1..176 | 1..176 | 960 | 100 | Plus |
