BO27565.complete Sequence
1090 bp assembled on 2010-08-18
GenBank Submission: KX798153
> BO27565.complete
GAAGTTATCAGTCGACATGGAACCGGTGCCCATCCGGCCAAAAGCGCCGG
GAGCGAGCAACCGCGGAGCCCTGCCGCTGGCGGCGAAGAAGCCGGCCAAG
AAGCGTACGTACCACTGCGGCGTTTGTTTTGCGGAGTTCTCTCGTCATCT
GGCCGCCAAGCGGCACGAGCAGCAGTGCTCCGTCAGGGTGAGGCGTCTTT
TCGTCTGCCCCCACTGCCTGACGCTTTTCGGCGAGGAGGCCCGGCTGGAG
CGGCATCGGGAGCGAAAGCACAACGATGGCCAGTTCCTGTGCCTGCAGTG
CGGCAAGAAGTACGCGTCAGCCACGTTTCTTTACCGTCATGTTGCCAGTT
GGCACGGCCAGCAGTCGCTGTTCTACTGCGACATGTGCACGGACAACTGC
AACGACGTTAAGACCTTTAGCGGGATGCTGGAGCTGCAGGAGCACGCCGA
GGAGGTGCATCGCCTGCGTACCCTGAAGTCCACGGCCAGTGATGCAGACA
GCCAGGTTGATGAAATGGAGGATCTTGAGATGCTAGAGGAGAACATTGAG
AACATACTGCCCAGCATCGACTGGGACGACGATCTCACCTTTGGCTGGCC
CACCGACCTGGACAAGGAGTCGTGCATTGTGAACGCTAAGCCGAGCGTTT
TCGTGTGTCCCTTCTGCGCCAACGGATTCCCCGGCAGTCTGAGCCTGGTG
CGGCACCTGGAGCAGGTTCACGAACGCAGTGCCCTGGACTGCTGCTACTG
TGGCAAGAGCCATGGCAGCCGAGAAGCCCTGCGGTCCCATCTGCAACGTG
TTCACATCCTCTTGCGCGGTCATGTGTGCGGTATTTGCCAGGCGGACTTC
GCCACTGCTGATCACCTAAAGAAGCACGTTAACAGTCTGCACCTGGACCA
CCGACCGCATCTGTGTCCCACGTGCGGAAAGAGATTCACCCAGCGGTGCC
ACCTCACCGATCACATAAAGACGGATCGCGGCCATGGACACGGCACTTAC
ACCTGTGAATTCTGCGTGCGGCCCTTCTTCCGGGCCATCGATCTCGAACG
GCATGTGTGTGAGGAACATCCGGCAAGCTTTCTAGACCAT
BO27565.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:44:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7101-RA | 1059 | CG7101-PA | 1..1056 | 17..1072 | 5280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7101-RA | 1454 | CG7101-RA | 73..1128 | 17..1072 | 5280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18831218..18831797 | 493..1072 | 2900 | 100 | Plus |
| X | 23542271 | X | 18830663..18831143 | 17..497 | 2405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:44:49 has no hits.
BO27565.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:45 Download gff for
BO27565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 58..1113 | 17..1074 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:00 Download gff for
BO27565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 73..1128 | 17..1074 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:33 Download gff for
BO27565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 73..1128 | 17..1074 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:33 Download gff for
BO27565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18830663..18831143 | 17..497 | 100 | -> | Plus |
| X | 18831223..18831797 | 498..1074 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:00 Download gff for
BO27565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18724696..18725176 | 17..497 | 100 | -> | Plus |
| arm_X | 18725256..18725830 | 498..1074 | 99 | | Plus |
BO27565.pep Sequence
Translation from 16 to 1090
> BO27565.pep
MEPVPIRPKAPGASNRGALPLAAKKPAKKRTYHCGVCFAEFSRHLAAKRH
EQQCSVRVRRLFVCPHCLTLFGEEARLERHRERKHNDGQFLCLQCGKKYA
SATFLYRHVASWHGQQSLFYCDMCTDNCNDVKTFSGMLELQEHAEEVHRL
RTLKSTASDADSQVDEMEDLEMLEENIENILPSIDWDDDLTFGWPTDLDK
ESCIVNAKPSVFVCPFCANGFPGSLSLVRHLEQVHERSALDCCYCGKSHG
SREALRSHLQRVHILLRGHVCGICQADFATADHLKKHVNSLHLDHRPHLC
PTCGKRFTQRCHLTDHIKTDRGHGHGTYTCEFCVRPFFRAIDLERHVCEE
HPASFLDH
BO27565.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7101-PA | 352 | CG7101-PA | 1..352 | 1..352 | 1959 | 100 | Plus |
| crol-PG | 878 | CG14938-PG | 244..552 | 27..351 | 266 | 25 | Plus |
| crol-PF | 907 | CG14938-PF | 244..549 | 27..347 | 266 | 25.5 | Plus |
| crol-PD | 878 | CG14938-PD | 244..520 | 27..347 | 261 | 25.7 | Plus |
| CG5245-PA | 501 | CG5245-PA | 105..410 | 27..351 | 248 | 25.5 | Plus |
| crol-PF | 907 | CG14938-PF | 287..675 | 14..356 | 223 | 21.1 | Plus |
| crol-PG | 878 | CG14938-PG | 277..646 | 32..356 | 221 | 21.8 | Plus |
| crol-PD | 878 | CG14938-PD | 277..646 | 32..356 | 218 | 21.5 | Plus |
| crol-PG | 878 | CG14938-PG | 222..492 | 63..347 | 212 | 25.1 | Plus |
| crol-PD | 878 | CG14938-PD | 222..492 | 63..347 | 196 | 23.7 | Plus |
