BO27571.complete Sequence
748 bp assembled on 2010-08-18
GenBank Submission: KX797023
> BO27571.complete
GAAGTTATCAGTCGACATGGAAACGATCAATCCCACGTTCTCGTACCTCA
CCAATCTGGAGGTAATGCAGATTCTACAGAAGATCAAAAGCACCAAAAAG
AAGTTCGGCATGCGCAACTTGGCCACGGTTACCTATGAGGCACTGCAGTA
TCTGGAGGAGTCGCCCTGCAAGACACAAACTCGTGAGAACATTATGAATT
ACGTTAAAGACCTGTCTTCTTATCGTCTAAAGTCCCAAGAGATCCTGCAA
ATGATCAACGATCCGCCTACAAGTGCACTACACACGCAACTGCTCATCGA
CGACAATAAAGCTCCACTAACCGATGAGGAGAACGAGAAAATCATTCAGC
TGAGCTACAAACACTTCCATGGTGGAGAAACCAAAGGCGCTGCTAAGGAA
ACACCGGCGGAAAAGCCTGCGGAGTCCACTGCGAAGGCCGGCAAGCAATC
TGGCGTAAAGCGTAATGCCCAGGCAAAATCCAATCCAGCGGAACAAATAG
CTCCAGCGGACAAAACCACGCCAGGTGATGGAGTTACTCCTGCGAATGTC
GCTACTCCTTCAAGTGAAGCCACTACTACTACTCCAGCAGAAGAAGCAAG
CCCAGTGGAAACATCGTCTTCAGAAAATAATGCTACTCCAGCAAATGAAG
CCACTACAGCGCCTGCAACGGATGCACCCACTTCAATGGAAACCAAGTCC
AATCCGACACCAGATGGAGAAAACCTCGGGGCAAGCTTTCTAGACCAT
BO27571.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:45:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rcp-RC | 717 | CG4875-PC | 1..714 | 17..730 | 3570 | 100 | Plus |
| Rcp-RB | 717 | CG4875-PB | 1..714 | 17..730 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rcp-RC | 1138 | CG4875-RC | 21..734 | 17..730 | 3570 | 100 | Plus |
| Rcp-RB | 1080 | CG4875-RB | 21..734 | 17..730 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16885075..16885513 | 292..730 | 2195 | 100 | Plus |
| X | 23542271 | X | 16884862..16885016 | 138..292 | 775 | 100 | Plus |
| X | 23542271 | X | 16884686..16884801 | 25..140 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:45:03 has no hits.
BO27571.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:48 Download gff for
BO27571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4875-RB | 19..732 | 17..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:05 Download gff for
BO27571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rcp-RB | 21..734 | 17..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:41 Download gff for
BO27571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rcp-RB | 21..734 | 17..732 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:41 Download gff for
BO27571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16884686..16884800 | 25..139 | 100 | -> | Plus |
| X | 16884864..16885016 | 140..292 | 100 | -> | Plus |
| X | 16885076..16885513 | 293..732 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:05 Download gff for
BO27571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16778719..16778833 | 25..139 | 100 | -> | Plus |
| arm_X | 16778897..16779049 | 140..292 | 100 | -> | Plus |
| arm_X | 16779109..16779546 | 293..732 | 99 | | Plus |
BO27571.pep Sequence
Translation from 16 to 748
> BO27571.pep
METINPTFSYLTNLEVMQILQKIKSTKKKFGMRNLATVTYEALQYLEESP
CKTQTRENIMNYVKDLSSYRLKSQEILQMINDPPTSALHTQLLIDDNKAP
LTDEENEKIIQLSYKHFHGGETKGAAKETPAEKPAESTAKAGKQSGVKRN
AQAKSNPAEQIAPADKTTPGDGVTPANVATPSSEATTTTPAEEASPVETS
SSENNATPANEATTAPATDAPTSMETKSNPTPDGENLGASFLDH
BO27571.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rcp-PC | 238 | CG4875-PC | 1..238 | 1..238 | 1214 | 100 | Plus |
| Rcp-PB | 238 | CG4875-PB | 1..238 | 1..238 | 1214 | 100 | Plus |
