Clone BO27582 Report

Search the DGRC for BO27582

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:275
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG14253-RC
Protein status:BO27582.pep: Imported from assembly
Sequenced Size:1204

Clone Sequence Records

BO27582.complete Sequence

1204 bp assembled on 2010-09-23

GenBank Submission: KX797509

> BO27582.complete
GAAGTTATCAGTCGACATGGAGCTGATAAAAAAATACAAACAAGGAAAGC
TAACCACCAGCGATATTGCCCATATAAATCATATAGTAATATGTCTCATG
GTCATGATAGCAGTATTCTCCATACTATGGAACATAACGCTGATCATGAT
ATCGGGTGATCTGTACGAGGGAATAGTCAGTGCCAAACTTATCTTCCGGG
AGCGCAGCGTTGATAAAATGGATGAGTCCAGCAAGGAGATCCTTCATCGG
GATTTCATCAAAGCCACCCAGTATGCCTATGGAAGGCAGTACTCCGTGCA
GGATGTCACACCTGAATCGCTGAAGAGCGAGAGCCAAATCTTTAAGTTAC
CGCATATCTACGAATCTATCGAGAATCGACCGAAATTGGAGCGTCTCATT
GCTGAAAATAAAGTGGAGGTTATTTCTACCACGACGACTCCTCCACCGAA
GATCACTTTCAATGCTGAGGCGGATCGCCACTTTTTGAGCACAATGTCCA
TCGATGTTATGGCCACTGTCTGGGAAAGAGGACCAGGAGCTCAGTTTGTC
TACGTATTTCCCCTCATATCAGAGATCGTGGCCATTATCTGGACAGCCAT
GTGTTTGATTTACCAGACAGGCAGCAAAAAGAGCTCAGTTTTGCCGAAGC
CGTGGCGCATTGTGGTGCCCTCCATCGTTATCTTCTCGGTGATGAGTTTG
TGCAGTGTAATCTACACAATCCTGACCAATGGCCACCTTAAGCACCTCTG
TGGCCAACTGAGGGAGAATCTCACAGATCCCACTGCCATCACCTGCGGCG
ATGCCATCGCCCTGTTGCGTCCCATCATTCACGACCACAACGTATCCCAT
GATACTTATCTGGAGCTCTTCCGCTTCAGCTACTTGATCGGAATGGTACT
GTGGATAGTGGCTCTGCTGGTCATGGTGCTGCGTTATGTATTCGCCGTGG
ACTTCCAGCTGGTGGACATTGATGATATGTTCGATAGCGGACGAAATGGC
TCTGCACAAGTTCAGATTCAACCGGTATACACTGAGGTAGTGCAGCAGAG
CAGTCCACAGCACCAGACGCAGATGCGTCCGAGATCGGAAGATGACTATC
AGAGTGCCAGGTCGCACTTGAGCGATCTTGCAGTTCCACTTCTGGAGGTG
CAAAGCCAGTCCCAGATTCCGCCAACTAGCTTGGCCGCAAGCTTTCTAGA
CCAT

BO27582.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:01:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14253-RF 1173 CG14253-PF 1..1170 17..1186 5850 100 Plus
CG14253-RA 1173 CG14253-PA 1..1170 17..1186 5850 100 Plus
CG14253-RD 1173 CG14253-PD 1..1170 17..1186 5850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:01:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14253-RF 2286 CG14253-RF 665..1834 17..1186 5850 100 Plus
CG14253-RA 1981 CG14253-RA 360..1529 17..1186 5850 100 Plus
CG14253-RD 2361 CG14253-RD 740..1909 17..1186 5850 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:01:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26984705..26985254 637..1186 2750 100 Plus
3R 32079331 3R 26983963..26984217 81..335 1275 100 Plus
3R 32079331 3R 26984276..26984434 336..494 795 100 Plus
3R 32079331 3R 26984490..26984636 490..636 720 99.3 Plus
3R 32079331 3R 26981688..26981751 17..80 320 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:01:22 has no hits.

BO27582.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-23 10:58:51 Download gff for BO27582.complete
Subject Subject Range Query Range Percent Splice Strand
CG14253-RD 725..1894 17..1188 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:46 Download gff for BO27582.complete
Subject Subject Range Query Range Percent Splice Strand
CG14253-RD 740..1909 17..1188 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:09:14 Download gff for BO27582.complete
Subject Subject Range Query Range Percent Splice Strand
CG14253-RD 740..1909 17..1188 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:09:14 Download gff for BO27582.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26984495..26984636 495..636 100 -> Plus
3R 26981688..26981751 17..80 100 -> Plus
3R 26983963..26984217 81..335 100 -> Plus
3R 26984276..26984434 336..494 100 -> Plus
3R 26984705..26985254 637..1188 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:46 Download gff for BO27582.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22809998..22810156 336..494 100 -> Plus
arm_3R 22810217..22810358 495..636 100 -> Plus
arm_3R 22807410..22807473 17..80 100 -> Plus
arm_3R 22809685..22809939 81..335 100 -> Plus
arm_3R 22810427..22810976 637..1188 99   Plus

BO27582.pep Sequence

Translation from 16 to 1204

> BO27582.pep
MELIKKYKQGKLTTSDIAHINHIVICLMVMIAVFSILWNITLIMISGDLY
EGIVSAKLIFRERSVDKMDESSKEILHRDFIKATQYAYGRQYSVQDVTPE
SLKSESQIFKLPHIYESIENRPKLERLIAENKVEVISTTTTPPPKITFNA
EADRHFLSTMSIDVMATVWERGPGAQFVYVFPLISEIVAIIWTAMCLIYQ
TGSKKSSVLPKPWRIVVPSIVIFSVMSLCSVIYTILTNGHLKHLCGQLRE
NLTDPTAITCGDAIALLRPIIHDHNVSHDTYLELFRFSYLIGMVLWIVAL
LVMVLRYVFAVDFQLVDIDDMFDSGRNGSAQVQIQPVYTEVVQQSSPQHQ
TQMRPRSEDDYQSARSHLSDLAVPLLEVQSQSQIPPTSLAASFLDH

BO27582.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:33:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14253-PF 390 CG14253-PF 1..390 1..390 1990 100 Plus
CG14253-PA 390 CG14253-PA 1..390 1..390 1990 100 Plus
CG14253-PD 390 CG14253-PD 1..390 1..390 1990 100 Plus
CG14253-PE 390 CG14253-PE 1..390 1..390 1990 100 Plus
CG14253-PC 390 CG14253-PC 1..390 1..390 1990 100 Plus